RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 VN1R4Q7Z5H5 301 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 KMT5CQ86Y97 462 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 CENPLQ8N0S6 344 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 OR4N4Q8N0Y3 316 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 LSMEM2Q8N112 164 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 CARFQ8N187 725 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PPM1NQ8N819 430 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 UHMK1Q8TAS1 419 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 MZB1Q8WU39 189 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 DCAKDQ8WVC6 231 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 SNRNP27Q8WVK2 155 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TTC9Q92623 222 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ISL2Q96A47 359 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TRIM44Q96DX7 344 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 FMO2Q99518 471 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TTC1Q99614 292 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 DHRS4Q9BTZ2 278 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TUBB2BQ9BVA1 445 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ACAT2Q9BWD1 397 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 SGPP1Q9BX95 441 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TSSK1BQ9BXA7 367 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC12A9Q9BXP2 914 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 SEMA4CQ9C0C4 833 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 AICDAQ9GZX7 198 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 CHRNA10Q9GZZ6 450 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 ACSS3Q9H6R3 686 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PPANQ9NQ55 473 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 STARD5Q9NSY2 213 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 SOHLH2Q9NX45 425 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 EURLQ9NYK6 297 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 TAC3Q9UHF0 121 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 POLG2Q9UHN1 485 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 CROTQ9UKG9 612 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 CORO1CQ9ULV4 474 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 COMMD10Q9Y6G5 202 aa6.91□□□□□ -1.3
TOPBP1-207ENST00000509162 PIEZO2Q9H5I5 2752 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 FOXO6A8MYZ6 492 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 STMND1H3BQB6 276 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 K7ENP7 123 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 EIF3FO00303 357 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 MATN2O00339 956 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 KPNA5O15131 536 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 POLR1CO15160 346 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 TAPBPO15533 448 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SCRG1O75711 98 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 C1QL1O75973 258 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 TBX6O95947 436 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CATP04040 527 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 THBS1P07996 1170 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 GSTA2P09210 222 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SBK3P0C264 359 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CBSLP0DN79 551 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SAT1P21673 171 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CBSP35520 551 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 PPARGP37231 505 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC6A12P48065 614 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 VSNL1P62760 191 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CXADRP78310 365 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CAV1Q03135 178 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SP140Q13342 867 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 TTLL9Q3SXZ7 439 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 TEX35Q5T0J7 233 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 DCAF12Q5T6F0 453 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 XP32Q5T750 250 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 ICE2Q659A1 982 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 ADNP2Q6IQ32 1131 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 INO80CQ6PI98 192 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CEACAM20Q6UY09 585 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 C3orf62Q6ZUJ4 267 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CYS1Q717R9 158 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 KLHDC8AQ8IYD2 350 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CACNA2D3Q8IZS8 1091 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 PLD6Q8N2A8 252 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 OR56A3Q8NH54 315 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SKA2Q8WVK7 121 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC44A1Q8WWI5 657 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 IFT81Q8WYA0 676 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 RAD51AP1Q96B01 352 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 PYCR2Q96C36 320 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 PDLIM5Q96HC4 596 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 UBXN10Q96LJ8 280 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CCDC138Q96M89 665 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 GPR78Q96P69 363 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 GBP5Q96PP8 586 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CPNE1Q99829 537 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 ULBP3Q9BZM4 244 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 NEUROD4Q9HD90 331 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 BRD7Q9NPI1 651 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM114A2Q9NRY5 505 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 UTP6Q9NYH9 597 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 TAS2R13Q9NYV9 303 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 CTNNAL1Q9UBT7 734 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 LNPEPQ9UIQ6 1025 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 TMA7Q9Y2S6 64 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 VWA7Q9Y334 891 aa6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 V9GYY5 206 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-207ENST00000509162 RELNP78509 3460 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms