RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 KCND3Q9UK17 655 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PILRAQ9UKJ1 303 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 PADI1Q9ULC6 663 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 HEATR5BQ9P2D3 2071 aa8.77□□□□□ -1.01
NUP54-207ENST00000508583 A0A087WV48 116 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 NCF1BA6NI72 391 aaPredicted RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 SMIM23A6NLE4 172 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 NCF1CA8MVU1 366 aaPredicted RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 C21orf140B9A014 251 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 C9J4A7 227 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 H7BY64 318 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 CLGNO14967 610 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 KLK10O43240 276 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 RAD1O60671 282 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 KATNA1O75449 491 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 DLGAP3O95886 979 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 NCF1P14598 390 aaPredicted RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 NPPBP16860 134 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 GCAP28676 217 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 SLCO1A2P46721 670 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 GLRBP48167 497 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 CCT5P48643 541 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 SKP1P63208 163 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 CDC16Q13042 620 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 ZIC1Q15915 447 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PDK4Q16654 411 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 NDUFA9Q16795 377 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PAGE2BQ5JRK9 111 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 MANEAQ5SRI9 462 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 GARNL3Q5VVW2 1013 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 FCRL6Q6DN72 434 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PWWP2BQ6NUJ5 590 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 NIPAL1Q6NVV3 410 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 THOC6Q86W42 341 aaKnown RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 DTX1Q86Y01 620 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 KRT78Q8N1N4 520 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 OR1L3Q8NH93 324 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 UBTD2Q8WUN7 234 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PYCR2Q96C36 320 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 CCDC126Q96EE4 140 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 SEC16BQ96JE7 1060 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PKNOX2Q96KN3 472 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PRAP1Q96NZ9 151 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 ATOH8Q96SQ7 321 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 UNKQ9C0B0 810 aaKnown RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 IQCGQ9H095 443 aaKnown RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 STMN4Q9H169 189 aaPredicted RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 MRPL46Q9H2W6 279 aaKnown RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 EHD1Q9H4M9 534 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PELI2Q9HAT8 420 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 FAM60AQ9NP50 221 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 SLC6A20Q9NP91 592 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PCMTD2Q9NV79 361 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 ARGLU1Q9NWB6 273 aaPredicted RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 SENP1Q9P0U3 644 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 XPR1Q9UBH6 696 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 OPTCQ9UBM4 332 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 MID2Q9UJV3 735 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 PTBP2Q9UKA9 531 aaKnown RBP8.76□□□□□ -1.01
NUP54-207ENST00000508583 IKZF3Q9UKT9 509 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 ZMIZ1Q9ULJ6 1067 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 SLC22A14Q9Y267 594 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 RAXQ9Y2V3 346 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 ANGPTL3Q9Y5C1 460 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 IGF2RP11717 2491 aa8.76□□□□□ -1.01
NUP54-207ENST00000508583 SDK2Q58EX2 2172 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 KCNE1BA0A087WTH5 132 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 A0A0J9YVX5 310 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TRBC2A0A5B9 178 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TLDC2A0PJX2 215 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 FITM1A5D6W6 292 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 URADA6NGE7 173 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 STX16-NPEPL1H3BU86 382 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 K7EPI3 171 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 UBXN8O00124 270 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 STX16O14662 325 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SNPHO15079 494 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 PRPF4O43172 522 aaKnown RBP eCLIP8.75□□□□□ -1.01
NUP54-207ENST00000508583 ZNF749O43361 778 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TLX3O43711 291 aaPredicted RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 CCNT2O60583 730 aaKnown RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 GLRA3O75311 464 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 RFPL1O75677 317 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SHBGP04278 402 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SLC35G6P0C7Q6 338 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 MYZAPP0CAP1 466 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CDH1P12830 882 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 EPB42P16452 691 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 STAT5AP42229 794 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 SLC6A12P48065 614 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 TMPRSS3P57727 454 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 VSX2P58304 361 aaPredicted RBP8.75□□□□□ -1.01
NUP54-207ENST00000508583 NAA20P61599 178 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 IRF9Q00978 393 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 MC1RQ01726 317 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 RGS1Q08116 209 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 DLG1Q12959 904 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 CLN3Q13286 438 aa8.75□□□□□ -1.01
NUP54-207ENST00000508583 LAPTM5Q13571 262 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms