RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 UGT2B15P54855 530 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR2B6P58173 313 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ARPC4P59998 168 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 LSM3P62310 102 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 RPP38P78345 283 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 MRPS15P82914 257 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 LAPTM5Q13571 262 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 VMACQ2NL98 169 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 LRIT3Q3SXY7 679 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZFP69Q49AA0 526 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC39A12Q504Y0 691 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CRTC2Q53ET0 693 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 USP39Q53GS9 565 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ALFQ53S48 1182 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 COLEC12Q5KU26 742 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 C10orf120Q5SQS8 335 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 STEAP3Q658P3 488 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 RAP1GAP2Q684P5 730 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 IL31Q6EBC2 164 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 KIAA1841Q6NSI8 718 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF783Q6ZMS7 281 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 GDPGP1Q6ZNW5 385 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM92BQ6ZTR7 304 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 AHSA2Q719I0 299 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CBLL1Q75N03 491 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CHST9Q7L1S5 443 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 LRRC70Q7Z2Q7 622 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC46A3Q7Z3Q1 461 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 GALNT5Q7Z7M9 940 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 TMEM179BQ7Z7N9 219 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DSG4Q86SJ6 1040 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 LRRTM3Q86VH5 581 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CYP4Z1Q86W10 505 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZSWIM9Q86XI8 627 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 RAB43Q86YS6 212 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 MSRB3Q8IXL7 192 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ABI1Q8IZP0 508 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HS3ST5Q8IZT8 346 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 STX19Q8N4C7 294 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CPA6Q8N4T0 437 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 C1orf52Q8N6N3 182 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SIMC1Q8NDZ2 872 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 C3orf58Q8NDZ4 430 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DENND6BQ8NEG7 585 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 VPS37AQ8NEZ2 397 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 LPCAT1Q8NF37 534 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR9Q1Q8NGQ5 310 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR10T2Q8NGX3 314 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SH3RF2Q8TEC5 729 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SGCDQ92629 289 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HTRA1Q92743 480 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 USP7Q93009 1102 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 IGSF8Q969P0 613 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 FBXO32Q969P5 355 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCDC97Q96F63 343 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDCA5Q96FF9 252 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CMTM7Q96FZ5 175 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 METTL2AQ96IZ6 378 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 HRASLS5Q96KN8 279 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SIGLEC11Q96RL6 698 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PARK7Q99497 189 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 NDEL1Q9GZM8 345 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 P2RY12Q9H244 342 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ELOVL6Q9H5J4 265 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLA2Q9H6Q3 261 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF556Q9HAH1 456 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 NMUR1Q9HB89 426 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 AASDHPPTQ9NRN7 309 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SACM1LQ9NTJ5 587 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 TMLHEQ9NVH6 421 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 FAM120CQ9NX05 1096 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ABI2Q9NYB9 513 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC25A37Q9NYZ2 338 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 IL37Q9NZH6 218 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CNOT2Q9NZN8 540 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 MARK1Q9P0L2 795 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNMT3BQ9UBC3 853 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SPASTQ9UBP0 616 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DKK3Q9UBP4 350 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PSORS1C1Q9UIG5 152 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZMYM5Q9UJ78 669 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 IKZF3Q9UKT9 509 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 AGO1Q9UL18 857 aaKnown RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 BTBD3Q9Y2F9 522 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 POFUT2Q9Y2G5 429 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCL27Q9Y4X3 112 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 NEUROG3Q9Y4Z2 214 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 SPO11Q9Y5K1 396 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 DNMT3AQ9Y6K1 912 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 PMF1-BGLAPU3KQ54 211 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 OTOFQ9HC10 1997 aa4.82□□□□□ -1.64
HMGB3P16-201ENST00000508037 BRCA1P38398 1863 aaKnown RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 PLXNB2O15031 1838 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 ANKRD66B4E2M5 251 aa4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P16-201ENST00000508037 E9PQ18 207 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms