RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 VPS29Q9UBQ0 182 aa14.02□□□□□ -0.16
DDX41-208ENST00000507955 DOCK9Q9BZ29 2069 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 WNT9AO14904 365 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 RECQL5O94762 991 aaPredicted RBP14.02□□□□□ -0.17
DDX41-208ENST00000507955 INHBBP09529 407 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 PFKLP17858 780 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 KIR3DL1P43629 444 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 VAC14Q08AM6 782 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 DMC1Q14565 340 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 HKDC1Q2TB90 917 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 CCNYL2Q5T2Q4 361 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 ZCCHC8Q6NZY4 707 aaKnown RBP14.02□□□□□ -0.17
DDX41-208ENST00000507955 FAM180BQ6P0A1 224 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 PRR23BQ6ZRT6 265 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 C1orf52Q8N6N3 182 aaKnown RBP14.02□□□□□ -0.17
DDX41-208ENST00000507955 ZNF420Q8TAQ5 688 aaPredicted RBP14.02□□□□□ -0.17
DDX41-208ENST00000507955 SH3KBP1Q96B97 665 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 FBXL8Q96CD0 374 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 CCDC115Q96NT0 180 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 TOR3AQ9H497 397 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 DCAF13Q9NV06 445 aaKnown RBP14.02□□□□□ -0.17
DDX41-208ENST00000507955 VNN3Q9NY84 501 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 LRRK1Q38SD2 2015 aa14.02□□□□□ -0.17
DDX41-208ENST00000507955 PLXNA2O75051 1894 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 A0A096LPI6 279 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 SLC5A10A0PJK1 596 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 EIF3FO00303 357 aaPredicted RBP14.01□□□□□ -0.17
DDX41-208ENST00000507955 AXIN1O15169 862 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 XYLBO75191 536 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ALBP02768 609 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 NUDT7P0C024 238 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 COX7A2P14406 83 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ZNF182P17025 639 aaPredicted RBP14.01□□□□□ -0.17
DDX41-208ENST00000507955 HOXB9P17482 250 aaPredicted RBP14.01□□□□□ -0.17
DDX41-208ENST00000507955 WNT3P56703 355 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 DCDC1P59894 354 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 FPGSQ05932 587 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 PIGFQ07326 219 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 SP140Q13342 867 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 STARD3Q14849 445 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 SMU1Q2TAY7 513 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 CDKL4Q5MAI5 379 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 LRIF1Q5T3J3 769 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 XAF1Q6GPH4 301 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 RNF165Q6ZSG1 346 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 TMPRSS11BQ86T26 416 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ZDHHC13Q8IUH4 622 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 TMEM132CQ8N3T6 1108 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 LZICQ8WZA0 190 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 THAP11Q96EK4 314 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 CCM2Q9BSQ5 444 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 C8orf4Q9NR00 106 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 AASSQ9UDR5 926 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 PLAGL1Q9UM63 463 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 TMEM98Q9Y2Y6 226 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 FPGTO14772 594 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ERN1O75460 977 aaKnown RBP14.01□□□□□ -0.17
DDX41-208ENST00000507955 PRSS23O95084 383 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 CPNE6O95741 557 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 PRPS2P11908 318 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 IL7RP16871 459 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ENGP17813 658 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 PRLHRP49683 370 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ALDH3A2P51648 485 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ST8SIA6P61647 398 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 DAG1Q14118 895 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 FNDC3BQ53EP0 1204 aaKnown RBP14.01□□□□□ -0.17
DDX41-208ENST00000507955 RAET1GQ6H3X3 334 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 VTCN1Q7Z7D3 282 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 CALHM3Q86XJ0 350 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ZC3H7AQ8IWR0 971 aaKnown RBP14.01□□□□□ -0.17
DDX41-208ENST00000507955 PLPP6Q8IY26 295 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 SYTL1Q8IYJ3 562 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 SMYD1Q8NB12 490 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 OR13F1Q8NGS4 319 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 HUS1BQ8NHY5 278 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 ZNF480Q8WV37 535 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 UGT2B28Q9BY64 529 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 AMBRA1Q9C0C7 1298 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 FANCEQ9HB96 536 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 FBXO10Q9UK96 956 aa14.01□□□□□ -0.17
DDX41-208ENST00000507955 H3BM21 787 aa14□□□□□ -0.17
DDX41-208ENST00000507955 KPNA5O15131 536 aa14□□□□□ -0.17
DDX41-208ENST00000507955 SCN2BO60939 215 aa14□□□□□ -0.17
DDX41-208ENST00000507955 NTRK1P04629 796 aa14□□□□□ -0.17
DDX41-208ENST00000507955 ABCB1P08183 1280 aaPredicted RBP14□□□□□ -0.17
DDX41-208ENST00000507955 RAE1P78406 368 aaKnown RBP14□□□□□ -0.17
DDX41-208ENST00000507955 ERAP2Q6P179 960 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CROCCP3Q8IVE0 287 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CHCHD4Q8N4Q1 142 aa14□□□□□ -0.17
DDX41-208ENST00000507955 OR7G3Q8NG95 312 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MAL2Q969L2 176 aa14□□□□□ -0.17
DDX41-208ENST00000507955 IL17FQ96PD4 163 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MYOCQ99972 504 aa14□□□□□ -0.17
DDX41-208ENST00000507955 SPNS1Q9H2V7 528 aa14□□□□□ -0.17
DDX41-208ENST00000507955 FAIMQ9NVQ4 179 aa14□□□□□ -0.17
DDX41-208ENST00000507955 MARK1Q9P0L2 795 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CFAP20Q9Y6A4 193 aaKnown RBP14□□□□□ -0.17
DDX41-208ENST00000507955 TSPAN11A1L157 253 aa14□□□□□ -0.17
DDX41-208ENST00000507955 CARNS1A5YM72 827 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms