RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MEP1AQ16819 746 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 BTBD16Q32M84 506 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 KAZNQ674X7 775 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 CRLF3Q8IUI8 442 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 CFAP61Q8NHU2 1237 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 FAM57AQ8TBR7 257 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 HDAC10Q969S8 669 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 MMABQ96EY8 250 aaPredicted RBP13.14□□□□□ -0.31
DDR1-260ENST00000507533 MIPEPQ99797 713 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 SMR3AQ99954 134 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 GBA3Q9H227 469 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 MKKSQ9NPJ1 570 aaPredicted RBP13.14□□□□□ -0.31
DDR1-260ENST00000507533 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
DDR1-260ENST00000507533 SLC39A10Q9ULF5 831 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 ABCA4P78363 2273 aa13.14□□□□□ -0.31
DDR1-260ENST00000507533 SNRNP200O75643 2136 aaKnown RBP13.13□□□□□ -0.31
DDR1-260ENST00000507533 IGHV3-20A0A0C4DH32 117 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 H7C0S8 307 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 PSTPIP1O43586 416 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 NRP2O60462 931 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 RPN2P04844 631 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
DDR1-260ENST00000507533 TPOP07202 933 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 SP1P08047 785 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 ANXA5P08758 320 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 CCDC175P0C221 793 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 ZNF24P17028 368 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 PTGER1P34995 402 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 PTGS2P35354 604 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 SLC26A3P40879 764 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 EFNA3P52797 238 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 OC90Q02509 493 aaPredicted RBP13.13□□□□□ -0.31
DDR1-260ENST00000507533 PRTGQ2VWP7 1150 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 RNFT1Q5M7Z0 435 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 SLC25A25Q6KCM7 469 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 RNF44Q7L0R7 432 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 CD163Q86VB7 1156 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 DCUN1D3Q8IWE4 304 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
DDR1-260ENST00000507533 HORMAD2Q8N7B1 307 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 AMER3Q8N944 861 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 P3H4Q92791 437 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 MVB12AQ96EY5 273 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 QKIQ96PU8 341 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDR1-260ENST00000507533 ALPK1Q96QP1 1244 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
DDR1-260ENST00000507533 TSGA10Q9BZW7 698 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 KCNK13Q9HB14 408 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 ZNF358Q9NW07 568 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 KLK4Q9Y5K2 254 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 HRH3Q9Y5N1 445 aa13.13□□□□□ -0.31
DDR1-260ENST00000507533 FLNAP21333 2647 aaKnown RBP13.12□□□□□ -0.31
DDR1-260ENST00000507533 GRID2IPA4D2P6 1211 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 PROM1O43490 865 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 CTAG2O75638 210 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 SUN1O94901 812 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 OR56A5P0C7T3 313 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 PSMB5P28074 263 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 CDKN2BP42772 138 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 MEOX1P50221 254 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 EMP3P54852 163 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 ITIH4Q14624 930 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 MAPKAPK3Q16644 382 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 SYT16Q17RD7 645 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 ITPRIPL1Q6GPH6 555 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 DENND5AQ6IQ26 1287 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 ZNF662Q6ZS27 426 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 CPEB2Q7Z5Q1 589 aaKnown RBP13.12□□□□□ -0.31
DDR1-260ENST00000507533 CCDC71Q8IV32 467 aaPredicted RBP13.12□□□□□ -0.31
DDR1-260ENST00000507533 ZC3H7AQ8IWR0 971 aaKnown RBP13.12□□□□□ -0.31
DDR1-260ENST00000507533 SLC22A15Q8IZD6 547 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 CLYBLQ8N0X4 340 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 LRRC57Q8N9N7 239 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 RND1Q92730 232 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 NPAS2Q99743 824 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 NLE1Q9NVX2 485 aaPredicted RBP13.12□□□□□ -0.31
DDR1-260ENST00000507533 GNPTGQ9UJJ9 305 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 EDARQ9UNE0 448 aa13.12□□□□□ -0.31
DDR1-260ENST00000507533 AAR2Q9Y312 384 aaKnown RBP13.12□□□□□ -0.31
DDR1-260ENST00000507533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDR1-260ENST00000507533 A0A1B0GTH9 108 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 GABRR3A8MPY1 467 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 KIAA1324LA8MWY0 1029 aaPredicted RBP13.11□□□□□ -0.31
DDR1-260ENST00000507533 HACD1B0YJ81 288 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 H0YGG7 62 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 KLK8O60259 260 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 MAN1A2O60476 641 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 NEURL1O76050 574 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 DGKQP52824 942 aa13.11□□□□□ -0.31
DDR1-260ENST00000507533 ARF3P61204 181 aaPredicted RBP13.11□□□□□ -0.31
DDR1-260ENST00000507533 HSPA14Q0VDF9 509 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms