RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	MMGT1	Q8N4V1	131 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CSNK1A1L	Q8N752	337 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PPM1N	Q8N819	430 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ADAMTS17	Q8TE56	1095 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FBF1	Q8TES7	1133 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ANKRD49	Q8WVL7	239 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CABS1	Q96KC9	395 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	OR2A5	Q96R48	311 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MCMBP	Q9BTE3	642 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TRIM55	Q9BYV6	548 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	UNK	Q9C0B0	810 aa	Known RBP	13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PHACTR1	Q9C0D0	580 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PCBD2	Q9H0N5	130 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SYNPO2L	Q9H987	977 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ACSS2	Q9NR19	701 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SLC22A11	Q9NSA0	550 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TMEM184C	Q9NVA4	438 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TUBD1	Q9UJT1	453 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TLK1	Q9UKI8	766 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SH2B3	Q9UQQ2	575 aa		13.51	□□□□□ -0.25
CCHCR1-222	ENST00000507459	BOD1L1	Q8NFC6	3051 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MKRN2OS	H3BPM6	223 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PHGDH	O43175	533 aa	Known RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FAM155B	O75949	473 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CD63	P08962	238 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ENO2	P09104	434 aa	Predicted RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PIM1	P11309	404 aa	Predicted RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	GP5	P40197	560 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CCL11	P51671	97 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PMS2	P54278	862 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	AP1S2	P56377	157 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	POU4F1	Q01851	419 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SSPN	Q14714	243 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MUM1	Q2TAK8	710 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MRPL14	Q6P1L8	145 aa	Known RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SBSN	Q6UWP8	590 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	OVCH1	Q7RTY7	1134 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PRICKLE2	Q7Z3G6	844 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	C17orf64	Q86WR6	236 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	RAB43	Q86YS6	212 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SPATA6L	Q8N4H0	392 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	KIF18A	Q8NI77	898 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	IFT81	Q8WYA0	676 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	COL26A1	Q96A83	441 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MRRF	Q96E11	262 aa	Known RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	TSPAN17	Q96FV3	270 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	RBBP8	Q99708	897 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	EGFL8	Q99944	293 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SGPP1	Q9BX95	441 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ING2	Q9H160	280 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ZDHHC18	Q9NUE0	388 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CTNNAL1	Q9UBT7	734 aa		13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	DMGDH	Q9UI17	866 aa	Known RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	RUVBL1	Q9Y265	456 aa	Known RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MDC1	Q14676	2089 aa	Known RBP	13.5	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FEZF1	A0PJY2	475 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	C1QA	P02745	245 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CDH1	P12830	882 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	NPPB	P16860	134 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	NR1D1	P20393	614 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CCND1	P24385	295 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	HRH2	P25021	359 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	STX2	P32856	288 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SPR	P35270	261 aa	Predicted RBP	13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CSNK1G2	P78368	415 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ILF2	Q12905	390 aa	Known RBP	13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ATP1A4	Q13733	1029 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	9e-9	■■■■□ 22.8
CCHCR1-222	ENST00000507459	TSN	Q15631	228 aa	Known RBP	13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PRTG	Q2VWP7	1150 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	GRTP1	Q5TC63	336 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	LCTL	Q6UWM7	567 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SHISA6	Q6ZSJ9	500 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FRA10AC1	Q70Z53	315 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	COX15	Q7KZN9	410 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	APLF	Q8IW19	511 aa	Predicted RBP	13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	OR2Y1	Q8NGV0	311 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	OR56A3	Q8NH54	315 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ATL1	Q8WXF7	558 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	PTER	Q96BW5	349 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	FBXL8	Q96CD0	374 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	C10orf90	Q96M02	699 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	YIPF2	Q9BWQ6	316 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SOX17	Q9H6I2	414 aa	Predicted RBP	13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	POPDC3	Q9HBV1	291 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ZNF304	Q9HCX3	659 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ENAM	Q9NRM1	1142 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CTSF	Q9UBX1	484 aa		13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MTRF1L	Q9UGC7	380 aa	Known RBP	13.49	□□□□□ -0.25
CCHCR1-222	ENST00000507459	MED13	Q9UHV7	2174 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459		A6NL46	340 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459		K7EM74	188 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459	P2RX6	O15547	441 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459	SLC28A2	O43868	658 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459	UMOD	P07911	640 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459	ANXA5	P08758	320 aa		13.48	□□□□□ -0.25
CCHCR1-222	ENST00000507459	CCDC166	P0CW27	439 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms