RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 MTCP1P56278 107 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 HILS1P60008 231 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 MYL7Q01449 175 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 UGCGQ16739 394 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 SGSM1Q2NKQ1 1148 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 HLA-BQ31612 363 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 KRTAP27-1Q3LI81 207 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 LBHQ53QV2 105 aaPredicted RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 LYSMD4Q5XG99 296 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 TRAT1Q6PIZ9 186 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 ENPP7Q6UWV6 458 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 PTAR1Q7Z6K3 402 aaPredicted RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 CATSPERDQ86XM0 798 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 FAM219AQ8IW50 185 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 CCAR2Q8N163 923 aaKnown RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 FAM89BQ8N5H3 189 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 IQUBQ8NA54 791 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 PRSS33Q8NF86 280 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 GPRC5AQ8NFJ5 357 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 OR7A2PQ8NGA2 310 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 SLCO2A1Q92959 643 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 FAM218AQ96MZ4 157 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 ZNF300Q96RE9 604 aaPredicted RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 CDCA3Q99618 268 aaPredicted RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 NKX3-1Q99801 234 aaPredicted RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 SYT15Q9BQS2 421 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 MCRIP2Q9BUT9 160 aaKnown RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 KATNB1Q9BVA0 655 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 AP1M1Q9BXS5 423 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 XAB2Q9HCS7 855 aaKnown RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.47□□□□□ -2.01
GYPB-207ENST00000506679 CHCHD3Q9NX63 227 aaKnown RBP2.47□□□□□ -2.01
GYPB-207ENST00000506679 PRSS21Q9Y6M0 314 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 PCNX3Q9H6A9 2034 aa2.47□□□□□ -2.01
GYPB-207ENST00000506679 TDRD15B5MCY1 1934 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 IL16Q14005 1332 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 IGLV7-46A0A075B6I9 117 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 IGKV3D-15A0A087WSY6 115 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 MPTX1A8MV57 137 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 SNURFLB1AK76 121 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 C17orf105B2RV13 164 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 CEACAM4O75871 244 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 NXPH2O95156 264 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 MOCS3O95396 460 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 SERPING1P05155 500 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 APOA4P06727 396 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 ZSCAN5DPP0CG00 497 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 FDPSP14324 419 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 DPEP1P16444 411 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 HLA-FP30511 346 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 TIA1P31483 386 aaKnown RBP eCLIP2.46□□□□□ -2.02
GYPB-207ENST00000506679 OR3A2P47893 321 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 CDX1P47902 265 aaPredicted RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 RGS7P49802 495 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 OR1D5P58170 312 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 CYCSP99999 105 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 TFCP2Q12800 502 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 DRP2Q13474 957 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 TRA2AQ13595 282 aaKnown RBP eCLIP2.46□□□□□ -2.02
GYPB-207ENST00000506679 TRIM29Q14134 588 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 NONOQ15233 471 aaKnown RBP eCLIP2.46□□□□□ -2.02
GYPB-207ENST00000506679 TAB1Q15750 504 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 TAZQ16635 292 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 NOTUMQ6P988 496 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 CPEB2Q7Z5Q1 589 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 ADCK2Q7Z695 626 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 NRARPQ7Z6K4 114 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 CCDC60Q8IWA6 550 aaPredicted RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 RCOR2Q8IZ40 523 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 MAPK15Q8TD08 544 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 RAD54LQ92698 747 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 TSACCQ96A04 125 aaPredicted RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 ZNF689Q96CS4 500 aaPredicted RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 NECTIN4Q96NY8 510 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 KLHL5Q96PQ7 755 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 RAB3IPQ96QF0 476 aaPredicted RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 SPAG5Q96R06 1193 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 USP28Q96RU2 1077 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 NDNQ99608 321 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 RBM4BQ9BQ04 359 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 MGME1Q9BQP7 344 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 SYT11Q9BT88 431 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 PI4K2AQ9BTU6 479 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 TDRD1Q9BXT4 1180 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 WWTR1Q9GZV5 400 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 FAM49AQ9H0Q0 323 aaPredicted RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 SDCBP2Q9H190 292 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 LMAN1LQ9HAT1 526 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 RAVER2Q9HCJ3 691 aaKnown RBP2.46□□□□□ -2.02
GYPB-207ENST00000506679 PRDM4Q9UKN5 801 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 SNX7Q9UNH6 387 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 PPP1R3CQ9UQK1 317 aa2.46□□□□□ -2.02
GYPB-207ENST00000506679 IGSF1Q8N6C5 1336 aa2.45□□□□□ -2.02
GYPB-207ENST00000506679 F8VVB4 439 aa2.45□□□□□ -2.02
GYPB-207ENST00000506679 F8VWA3 439 aa2.45□□□□□ -2.02
GYPB-207ENST00000506679 H7C423 109 aa2.45□□□□□ -2.02
GYPB-207ENST00000506679 DUS4LO95620 317 aaKnown RBP2.45□□□□□ -2.02
GYPB-207ENST00000506679 F3P13726 295 aa2.45□□□□□ -2.02
GYPB-207ENST00000506679 IFNAR1P17181 557 aa2.45□□□□□ -2.02
GYPB-207ENST00000506679 RPL35AP18077 110 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms