RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 XKR8Q9H6D3 395 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
LIN54-206ENST00000506560 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
LIN54-206ENST00000506560 TRBV5-3A0A0A0MS03 114 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 POM121BA6NF01 834 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 OR52A4PA6NMU1 304 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 ANHXE9PGG2 379 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 NARSO43776 548 aaKnown RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 RNGTTO60942 597 aaKnown RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 IL6P05231 212 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 LAMP1P11279 417 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 IGFBP4P22692 258 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 S100A3P33764 101 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 WNT3P56703 355 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 IRX1P78414 480 aaPredicted RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 CYP4F3Q08477 520 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 BNIP2Q12982 314 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 MLF2Q15773 248 aaPredicted RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 SMU1Q2TAY7 513 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 METRNLQ641Q3 311 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 GLYATQ6IB77 296 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 FAM180BQ6P0A1 224 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 TMEM154Q6P9G4 183 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 TMEM92Q6UXU6 159 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 ARMCX6Q7L4S7 300 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 EPHX4Q8IUS5 362 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 JPH3Q8WXH2 748 aaPredicted RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 EME1Q96AY2 570 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 BIRC7Q96CA5 298 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 GABRG3Q99928 467 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 SLC17A9Q9BYT1 436 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 UBAP1Q9NZ09 502 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 TAC3Q9UHF0 121 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 ARHGEF17Q96PE2 2063 aaPredicted RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 PIPSLA2A3N6 862 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 SOCS2O14508 198 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 UGDHO60701 494 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 HNF4AP41235 474 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 TNFRSF4P43489 277 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 ACSM2AQ08AH3 577 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 ACSM2BQ68CK6 577 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 NUDT18Q6ZVK8 323 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 VN1R5Q7Z5H4 357 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 KLHDC8AQ8IYD2 350 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 MMP21Q8N119 569 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 FRMD1Q8N878 549 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 FBXO15Q8NCQ5 510 aaPredicted RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 WDR48Q8TAF3 677 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 FIG4Q92562 907 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 DUS3LQ96G46 650 aaKnown RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 CENPKQ9BS16 269 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 MENTQ9BUN1 341 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 C1QTNF2Q9BXJ5 285 aa11.76□□□□□ -0.53
LIN54-206ENST00000506560 EXO1Q9UQ84 846 aaKnown RBP11.76□□□□□ -0.53
LIN54-206ENST00000506560 SHISA7A6NL88 538 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 AQP12BA6NM10 295 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 PLRG1O43660 514 aaKnown RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 PEX1O43933 1283 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 DNTTP04053 509 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 CAPNS1P04632 268 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 CEACAM5P06731 702 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 PIM1P11309 404 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 MYCLP1P12525 358 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 HOXB9P17482 250 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 HTR1EP28566 365 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 ACSL1P33121 698 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 CYP4F2P78329 520 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 MC1RQ01726 317 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 NKG7Q16617 165 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 RUNDC3AQ59EK9 446 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 AQP12AQ8IXF9 295 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 GLB1L3Q8NCI6 653 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 FLCNQ8NFG4 579 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 PNPT1Q8TCS8 783 aaKnown RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 UHRF1Q96T88 793 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 CCDC177Q9NQR7 707 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 PNMA8BQ9ULN7 279 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 DYTNA2CJ06 578 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 SCN2BO60939 215 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 KLHL18O94889 574 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 TBX6O95947 436 aaPredicted RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 STATHP02808 62 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 C1GALT1C1LP0DN25 315 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 PRPS2P11908 318 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 MTHFRP42898 656 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 CSTF3Q12996 717 aaKnown RBP11.75□□□□□ -0.53
LIN54-206ENST00000506560 SGCGQ13326 291 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 CLCA4Q14CN2 919 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 C16orf72Q14CZ0 275 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 MED27Q6P2C8 311 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 ENPP6Q6UWR7 440 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 ERMP1Q7Z2K6 904 aa11.75□□□□□ -0.53
LIN54-206ENST00000506560 GALNT10Q86SR1 603 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms