RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 FAM162AQ96A26 154 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 DCLRE1CQ96SD1 692 aaKnown RBP12.91□□□□□ -0.34
LETM1-203ENST00000505551 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 SPATA9Q9BWV2 254 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 FNIP2Q9P278 1114 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 ATP6V1HQ9UI12 483 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 NT5C1B-RDH14C9J2C7 533 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 CXCR6O00574 342 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 CA12O43570 354 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 ZNF623O75123 536 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 ATG13O75143 517 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 SERPINI2O75830 405 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 HOXD4P09016 255 aaPredicted RBP12.91□□□□□ -0.34
LETM1-203ENST00000505551 EPHA2P29317 976 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 HMGCLP35914 325 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 NRIP1P48552 1158 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 FKBP1BP68106 108 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 SOX4Q06945 474 aaPredicted RBP12.91□□□□□ -0.34
LETM1-203ENST00000505551 GNASQ5JWF2 1037 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 OTUD1Q5VV17 481 aaPredicted RBP12.91□□□□□ -0.34
LETM1-203ENST00000505551 CCDC149Q6ZUS6 474 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 TMPRSS9Q7Z410 1059 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 GPR149Q86SP6 731 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 KIF18BQ86Y91 864 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 RASAL3Q86YV0 1011 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 LINC00518Q8N0U6 118 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 C9orf62Q8N4C0 152 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 MSANTD3Q96H12 275 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 TMLHEQ9NVH6 421 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 MAN2B2Q9Y2E5 1009 aa12.91□□□□□ -0.34
LETM1-203ENST00000505551 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 RRN3P2A6NIE6 340 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 DFFAO00273 331 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CACNG3O60359 315 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 APBB3O95704 486 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CDK1P06493 297 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 ERCC2P18074 760 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 PAMP19021 973 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 AZGP1P25311 298 aaKnown RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 SLC19A1P41440 591 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CPT1AP50416 773 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 GPR19Q15760 415 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 GARNL3Q5VVW2 1013 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 C19orf48Q6RUI8 117 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 KIAA1324Q6UXG2 1013 aaKnown RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 TMPRSS11AQ6ZMR5 421 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 RAB44Q7Z6P3 723 aaPredicted RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 ENTHD1Q8IYW4 607 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 NLGN4YQ8NFZ3 816 aaPredicted RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 OR8H1Q8NGG4 311 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 GPR151Q8TDV0 419 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 TESCQ96BS2 214 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 TBATAQ96M53 351 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CMTM3Q96MX0 182 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 TBL1YQ9BQ87 522 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 NUSAP1Q9BXS6 441 aaKnown RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 SLC35C2Q9NQQ7 365 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 PLCXD1Q9NUJ7 323 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 SMIM28A0A1B0GU29 152 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 ELOVL7A1L3X0 281 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CLEC2LP0C7M8 214 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 LCP1P13796 627 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 ZNF37AP17032 561 aaPredicted RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 MAGEA2P43356 314 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 KIR2DL3P43628 341 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 PER3P56645 1201 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 HOXC5Q00444 222 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 LCP2Q13094 533 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CRHR2Q13324 411 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 QPRTQ15274 297 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 SGCAQ16586 387 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 PTCHD3Q3KNS1 767 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 SLC25A52Q3SY17 297 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 CARD16Q5EG05 197 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 MLIPQ5VWP3 458 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 SYPL2Q5VXT5 272 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 NPWQ8N729 165 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 EXT2Q93063 718 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 MYDGFQ969H8 173 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 WACQ9BTA9 647 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 TBCDQ9BTW9 1192 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 PITHD1Q9GZP4 211 aaPredicted RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 PPA2Q9H2U2 334 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 MCCC2Q9HCC0 563 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 ABCB8Q9NUT2 735 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 ING3Q9NXR8 418 aa12.9□□□□□ -0.34
LETM1-203ENST00000505551 DIMT1Q9UNQ2 313 aaKnown RBP12.9□□□□□ -0.34
LETM1-203ENST00000505551 SYNJ2BP-COX16A0A087WUM0 186 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 F8W810 466 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 SULT1B1O43704 296 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 POP4O95707 220 aaKnown RBP12.9□□□□□ -0.35
LETM1-203ENST00000505551 IFNA16P05015 189 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 PGRP06401 933 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 MTHFD2P13995 350 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 MATKP42679 507 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 SULT1E1P49888 294 aa12.9□□□□□ -0.35
LETM1-203ENST00000505551 LAPTM4AQ15012 233 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms