RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 AIG1Q9NVV5 245 aa10□□□□□ -0.81
TPM3-217ENST00000504663 ASIC5Q9NY37 505 aa10□□□□□ -0.81
TPM3-217ENST00000504663 OR6C2Q9NZP2 312 aa10□□□□□ -0.81
TPM3-217ENST00000504663 SPASTQ9UBP0 616 aa10□□□□□ -0.81
TPM3-217ENST00000504663 LNPEPQ9UIQ6 1025 aa10□□□□□ -0.81
TPM3-217ENST00000504663 DYRK1BQ9Y463 629 aa10□□□□□ -0.81
TPM3-217ENST00000504663 KLK4Q9Y5K2 254 aa10□□□□□ -0.81
TPM3-217ENST00000504663 KCNE2Q9Y6J6 123 aa10□□□□□ -0.81
TPM3-217ENST00000504663 COLEC10Q9Y6Z7 277 aa10□□□□□ -0.81
TPM3-217ENST00000504663 U3KQA8 63 aa10□□□□□ -0.81
TPM3-217ENST00000504663 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
TPM3-217ENST00000504663 VPS13AQ96RL7 3174 aa10□□□□□ -0.81
TPM3-217ENST00000504663 WDFY4Q6ZS81 3184 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 A0A1B0GTQ1 180 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 FAM221BA6H8Z2 402 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ZNF839A8K0R7 811 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PATE3B3GLJ2 98 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 SLC22A2O15244 555 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 CCDC22O60826 627 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 RSL1D1O76021 490 aaKnown RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 KRT6AP02538 564 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 KRT6BP04259 564 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 CTSEP14091 401 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 UGT2B7P16662 529 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 LBPP18428 481 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 GPX3P22352 226 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PIK3R1P27986 724 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 CNR2P34972 360 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 KRT6CP48668 564 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 HNRNPH2P55795 449 aaKnown RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 C21orf59P57076 290 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ZNF33BQ06732 778 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PRDX1Q06830 199 aaKnown RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 DMTNQ08495 405 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 TBL3Q12788 808 aaKnown RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 GRIK2Q13002 908 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 DEFB133Q30KQ1 61 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 RFTN2Q52LD8 501 aaPredicted RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 TMEM164Q5U3C3 297 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 KIAA1614Q5VZ46 1190 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PAQR7Q86WK9 346 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 C17orf64Q86WR6 236 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ZFAND4Q86XD8 727 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ZNF761Q86XN6 746 aaPredicted RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 GKN2Q86XP6 184 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 SYT12Q8IV01 421 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.99□□□□□ -0.81
TPM3-217ENST00000504663 SDR16C5Q8N3Y7 309 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ARL14Q8N4G2 192 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 FAM46DQ8NEK8 389 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 OR4E2Q8NGC2 313 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 OR9I1Q8NGQ6 314 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 FBXO27Q8NI29 283 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 LCN9Q8WX39 176 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 RSC1A1Q92681 617 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 TUBGCP3Q96CW5 907 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 APIPQ96GX9 242 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PPM1MQ96MI6 270 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ELF4Q99607 663 aaPredicted RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 CCT7Q99832 543 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 TBC1D10AQ9BXI6 508 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 ZNF717Q9BY31 904 aaPredicted RBP9.99□□□□□ -0.81
TPM3-217ENST00000504663 PCBD2Q9H0N5 130 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 RHBGQ9H310 441 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 NT5DC2Q9H857 520 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 UCK1Q9HA47 277 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 DMRT3Q9NQL9 472 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 METRNQ9UJH8 293 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PPT2Q9UMR5 302 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 TRIM33Q9UPN9 1127 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 PCDHB11Q9Y5F2 797 aa9.99□□□□□ -0.81
TPM3-217ENST00000504663 LILRA5A6NI73 299 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 MAGEB17A8MXT2 336 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 C4orf51C9J302 202 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SLC28A1O00337 649 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 GIPC1O14908 333 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 HAT1O14929 419 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 UBDO15205 165 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 LCMT2O60294 686 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 PEX11AO75192 247 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 VPS4BO75351 444 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 ULK1O75385 1050 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 CRCPO75575 148 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 UNC5CO95185 931 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 EPN2O95208 641 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 CHEK2O96017 543 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 VIPP01282 170 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SLC2A4P14672 509 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 IL12AP29459 219 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 HOXD12P35452 270 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SCTRP47872 440 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 ERVK-8P63133 956 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 SNRPNP63162 240 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 RAE1P78406 368 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 HHEXQ03014 270 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 EMX2Q04743 252 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 HYAL2Q12891 473 aa9.98□□□□□ -0.81
TPM3-217ENST00000504663 CSTF3Q12996 717 aaKnown RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 SIM2Q14190 667 aaPredicted RBP9.98□□□□□ -0.81
TPM3-217ENST00000504663 SQLEQ14534 574 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms