RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 SSR1P43307 286 aaKnown RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 CYB561P49447 251 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 WNT3AP56704 352 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 MAT1AQ00266 395 aaKnown RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 PPP1R2P3Q6NXS1 205 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 PQLC3Q8N755 202 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 RELL2Q8NC24 303 aaPredicted RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 OR4K2Q8NGD2 314 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 LINC01560Q8TB33 94 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 M1APQ8TC57 530 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 SLC22A18Q96BI1 424 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 BTBD6Q96KE9 485 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 IL17FQ96PD4 163 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 CYTH2Q99418 400 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 YIPF4Q9BSR8 244 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 VN1R1Q9GZP7 353 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 MMP25Q9NPA2 562 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 B4GALT7Q9UBV7 327 aa11.76□□□□□ -0.53
LSM6-204ENST00000504181 C19orf25Q9UFG5 118 aaPredicted RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 KLF13Q9Y2Y9 288 aaPredicted RBP11.76□□□□□ -0.53
LSM6-204ENST00000504181 DOCK7Q96N67 2140 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 KLRC4-KLRK1H3BQV0 150 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 CLDN4O14493 209 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 PEX1O43933 1283 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 DNAJB6O75190 326 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
LSM6-204ENST00000504181 S1PR4O95977 384 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 HRGP04196 525 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 TNNT3P45378 269 aaPredicted RBP11.75□□□□□ -0.53
LSM6-204ENST00000504181 ASCL1P50553 236 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 TAS2R50P59544 299 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 GPR85P60893 370 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 XIAPP98170 497 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 DMTNQ08495 405 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 EXT1Q16394 746 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 MINDY4Q4G0A6 757 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 C10orf62Q5T681 223 aaPredicted RBP11.75□□□□□ -0.53
LSM6-204ENST00000504181 PAOXQ6QHF9 649 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 MICALCLQ6ZW33 695 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 CLDN19Q8N6F1 224 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
LSM6-204ENST00000504181 ULK4Q96C45 1275 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 LRRC46Q96FV0 321 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 PIP5K1AQ99755 562 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 ZNF670Q9BS34 389 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 ADGRE2Q9UHX3 823 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 HEY1Q9Y5J3 304 aa11.75□□□□□ -0.53
LSM6-204ENST00000504181 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 A0A0A6YYC8 382 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 OR2W5A6NFC9 320 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 AGAP14A8MT82 685 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 TARM1B6A8C7 271 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 I3L1I5 382 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 LIN7AO14910 233 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 FTLP02792 175 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 CD9P21926 228 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 PSMB5P28074 263 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 PIGHQ14442 188 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 SLC1A5Q15758 541 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 HKDC1Q2TB90 917 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 PRTGQ2VWP7 1150 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 TCP11X2Q5H9J9 407 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 C1orf185Q5T7R7 199 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 RNF44Q7L0R7 432 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 ANKRD37Q7Z713 158 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 RPS19BP1Q86WX3 136 aaKnown RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 SLC13A5Q86YT5 568 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 ZFP62Q8NB50 900 aaPredicted RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 HEXDCQ8WVB3 486 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 ZUFSPQ96AP4 578 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 MVB12AQ96EY5 273 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 MRPL47Q9HD33 250 aaKnown RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 FAM153AQ9UHL3 310 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 RUVBL1Q9Y265 456 aaKnown RBP11.74□□□□□ -0.53
LSM6-204ENST00000504181 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
LSM6-204ENST00000504181 MBD3L4A6NDZ8 208 aaPredicted RBP11.73□□□□□ -0.53
LSM6-204ENST00000504181 MBD3L5A6NJ08 208 aaPredicted RBP11.73□□□□□ -0.53
LSM6-204ENST00000504181 BCKDKO14874 412 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 SLC16A5O15375 505 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 FOXS1O43638 330 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 BMP5P22003 454 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 CDKN1CP49918 316 aaPredicted RBP11.73□□□□□ -0.53
LSM6-204ENST00000504181 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
LSM6-204ENST00000504181 SHISA5Q8N114 240 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 KIF2BQ8N4N8 673 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 NEK11Q8NG66 645 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 OR13C4Q8NGS5 318 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 CREB3L4Q8TEY5 395 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 ELMO1Q92556 727 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 PIGTQ969N2 578 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 MIPEPQ99797 713 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 SYT11Q9BT88 431 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 FICDQ9BVA6 458 aa11.73□□□□□ -0.53
LSM6-204ENST00000504181 ZDHHC3Q9NYG2 299 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms