RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CHST8Q9H2A9 424 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 EPB41L4BQ9H329 900 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 TLK1Q9UKI8 766 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 SH2B3Q9UQQ2 575 aa17.44■□□□□ 0.38
PDLIM7-209ENST00000503346 ITPR1Q14643 2758 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 A0A096LPK6 155 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 EXOC1LA0A1B0GW35 172 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 CCDC189A1A4V9 331 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 H0YGG7 62 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 HAT1O14929 419 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 KRT38O76015 456 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 RAB40ALP0C0E4 278 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 AGXTP21549 392 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 TYK2P29597 1187 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 ARF3P61204 181 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 CSNK1G2P78368 415 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 PRTGQ2VWP7 1150 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 CRTC2Q53ET0 693 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 TAF1BQ53T94 588 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 LCN10Q6JVE6 187 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 FAM198BQ6UWH4 519 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 CENPLQ8N0S6 344 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 TTC29Q8NA56 475 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 STAG3L4Q8TBR4 150 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 STARD8Q92502 1023 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 SYNPO2LQ9H987 977 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 TXLNGQ9NUQ3 528 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 DHCR7Q9UBM7 475 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 FETUBQ9UGM5 382 aa17.43■□□□□ 0.38
PDLIM7-209ENST00000503346 SNRNP200O75643 2136 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 RECKO95980 971 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 CAPN1P07384 714 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 CDH1P12830 882 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 TFEBP19484 476 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 GCAP28676 217 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 PTPN4P29074 926 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 GGT5P36269 586 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 SLC6A12P48065 614 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 KCNC1P48547 511 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 EMP3P54852 163 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 IRF9Q00978 393 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 MC1RQ01726 317 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 SLC29A2Q14542 456 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 FAM83EQ2M2I3 478 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 FAM214AQ32MH5 1076 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 THOC6Q86W42 341 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 PDPRQ8NCN5 879 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 OR4K1Q8NGD4 311 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 KCTD4Q8WVF5 259 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 NXNL1Q96CM4 212 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 THAP11Q96EK4 314 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 ATOH8Q96SQ7 321 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 NLNQ9BYT8 704 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 ALG9Q9H6U8 611 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 STARD5Q9NSY2 213 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 CUTCQ9NTM9 273 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 RNF112Q9ULX5 631 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 SLC22A14Q9Y267 594 aa17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 FARSAQ9Y285 508 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 MRPS18BQ9Y676 258 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-209ENST00000503346 KCNE1BA0A087WTH5 132 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 A0A1B0GX78 115 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 NCF1BA6NI72 391 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 NCF1CA8MVU1 366 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 DSCR3O14972 297 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 KERAO60938 352 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 KATNA1O75449 491 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 KLHL2O95198 593 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 ONECUT2O95948 504 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 EIF2S1P05198 315 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 NCF1P14598 390 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 CCR8P51685 355 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 RPS15AP62244 130 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 RPS15P62841 145 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 DCDP81605 110 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 RHDQ02161 417 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 C1orf189Q5VU69 101 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 SULT1C3Q6IMI6 304 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 ADGRD1Q6QNK2 874 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 TTLL10Q6ZVT0 673 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 PLD3Q8IV08 490 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 CSNK1A1LQ8N752 337 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 RHEBL1Q8TAI7 183 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 SLC5A11Q8WWX8 675 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 NEIL2Q969S2 332 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 RERGQ96A58 199 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 C17orf62Q9BQA9 187 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 TMEM79Q9BSE2 394 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 SARGQ9BW04 601 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 DYRK1BQ9Y463 629 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 KCNE2Q9Y6J6 123 aa17.41■□□□□ 0.38
PDLIM7-209ENST00000503346 HYKKA2RU49 373 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 TRIM49D1C9J1S8 452 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 TXNDC9O14530 226 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 NKX2-8O15522 239 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 TAPBPO15533 448 aa17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 IPO13O94829 963 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 SNRPAP09012 282 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-209ENST00000503346 ALAS2P22557 587 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms