RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ARFIP1P53367 373 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 FOLH1Q04609 750 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ELP6Q0PNE2 266 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 CBX3Q13185 183 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ELAVL3Q14576 367 aaKnown RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 ZNF234Q14588 700 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 AADACL4Q5VUY2 407 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 FBXL19Q6PCT2 694 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 PTRH1Q86Y79 214 aaKnown RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 SPPL2CQ8IUH8 684 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 HID1Q8IV36 788 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SFTPA1Q8IWL2 248 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SGK3Q96BR1 496 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 FAM129BQ96TA1 746 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 KCTD14Q9BQ13 255 aaPredicted RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 DPY30Q9C005 99 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ATG10Q9H0Y0 220 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ELOVL6Q9H5J4 265 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 ARMC1Q9NVT9 282 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 THG1LQ9NWX6 298 aaKnown RBP11.23□□□□□ -0.61
USP46-204ENST00000503060 GDE1Q9NZC3 331 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 EMC3Q9P0I2 261 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 SNX13Q9Y5W8 968 aa11.23□□□□□ -0.61
USP46-204ENST00000503060 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
USP46-204ENST00000503060 PLK4O00444 970 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 TXNDC9O14530 226 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 AREL1O15033 823 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 PRAMEF4O60810 478 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 THEGLP0DJG4 465 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 FCARP24071 287 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 PFN3P60673 137 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 PWP1Q13610 501 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 INPP5AQ14642 412 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 IGSF11Q5DX21 431 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.22□□□□□ -0.61
USP46-204ENST00000503060 PRAMEF9Q5VWM5 478 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 ARHGAP11AQ6P4F7 1023 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 SUSD1Q6UWL2 747 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 NLRP8Q86W28 1048 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 IFNEQ86WN2 208 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 LILRA3Q8N6C8 439 aaPredicted RBP11.22□□□□□ -0.61
USP46-204ENST00000503060 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 GLB1L3Q8NCI6 653 aaPredicted RBP11.22□□□□□ -0.61
USP46-204ENST00000503060 CGREF1Q99674 301 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 TMEM245Q9H330 911 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 CNOT11Q9UKZ1 510 aaKnown RBP11.22□□□□□ -0.61
USP46-204ENST00000503060 CFL2Q9Y281 166 aa11.22□□□□□ -0.61
USP46-204ENST00000503060 DHRS12A0PJE2 317 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 DPPA5A6NC42 116 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 TMEM247A6NEH6 219 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 SULT1B1O43704 296 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 GPR37L1O60883 481 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 RECQL5O94762 991 aaPredicted RBP11.21□□□□□ -0.61
USP46-204ENST00000503060 SOD1P00441 154 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 ADRB3P13945 408 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 PBX2P40425 430 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 ARHGDIBP52566 201 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 USP39Q53GS9 565 aaKnown RBP11.21□□□□□ -0.61
USP46-204ENST00000503060 TANGO2Q6ICL3 276 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 HMBOX1Q6NT76 420 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 SLC22A8Q8TCC7 542 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 SLC13A3Q8WWT9 602 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 NUS1Q96E22 293 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 PPP1R16AQ96I34 528 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 MAGEB10Q96LZ2 347 aaPredicted RBP11.21□□□□□ -0.61
USP46-204ENST00000503060 SEMA6AQ9H2E6 1030 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 EPHX3Q9H6B9 360 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 DZANK1Q9NVP4 752 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 TMEM5Q9Y2B1 443 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.61
USP46-204ENST00000503060 DENRO43583 198 aaKnown RBP11.21□□□□□ -0.61
USP46-204ENST00000503060 OR5F1O95221 314 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 CATP04040 527 aaKnown RBP11.21□□□□□ -0.61
USP46-204ENST00000503060 BCKDHAP12694 445 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 C6P13671 934 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 PRPH2P23942 346 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 HTR1EP28566 365 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 CHIT1Q13231 466 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 SHHQ15465 462 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 PLA2G4EQ3MJ16 856 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 FAM174BQ3ZCQ3 159 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 FBXO43Q4G163 708 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 BCL7AQ4VC05 210 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 PPP2R2DQ66LE6 453 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 ERMP1Q7Z2K6 904 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 SLC22A15Q8IZD6 547 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 SIX5Q8N196 739 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 GALNT4Q8N4A0 578 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 CDC26Q8NHZ8 85 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 FAM110BQ8TC76 370 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 ATL1Q8WXF7 558 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 FOXJ1Q92949 421 aa11.21□□□□□ -0.61
USP46-204ENST00000503060 EME1Q96AY2 570 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms