RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 SPNS3Q6ZMD2 512 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 SH2D5Q6ZV89 423 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 CYP4V2Q6ZWL3 525 aaPredicted RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 LYSMD3Q7Z3D4 306 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 UMODL1-AS1Q8N2C9 162 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 PYROXD2Q8N2H3 581 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 CENPSQ8N2Z9 138 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 ARFGAP1Q8N6T3 406 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 RBMXL3Q8N7X1 1067 aaKnown RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 CNTD1Q8N815 330 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 RTL3Q8N8U3 475 aaKnown RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 NAT8LQ8N9F0 302 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 ANGPTL6Q8NI99 470 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 GRPEL2Q8TAA5 225 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 SLC35B2Q8TB61 432 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 CALML6Q8TD86 181 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 FNIP1Q8TF40 1166 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 CT55Q8WUE5 264 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 PYDC1Q8WXC3 89 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 THAP4Q8WY91 577 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 RAB7BQ96AH8 199 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 ASB9Q96DX5 294 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 MED30Q96HR3 178 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 DNAJC1Q96KC8 554 aaKnown RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 FAM111AQ96PZ2 611 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 PEBP4Q96S96 227 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 MDFIQ99750 246 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 TRIM56Q9BRZ2 755 aaKnown RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 NAT9Q9BTE0 207 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 GSDMCQ9BYG8 508 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 GBA3Q9H227 469 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 TPK1Q9H3S4 243 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 EHD1Q9H4M9 534 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 SP140LQ9H930 580 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 FGF22Q9HCT0 170 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 PARVAQ9NVD7 372 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 ARMC1Q9NVT9 282 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 GPR83Q9NYM4 423 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 IL20Q9NYY1 176 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 NPAP1Q9NZP6 1156 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 TAAR2Q9P1P5 351 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 VTI1BQ9UEU0 232 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 MFHAS1Q9Y4C4 1052 aa5.02□□□□□ -1.61
HTT-202ENST00000502820 TMEM184BQ9Y519 407 aaPredicted RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 TP53BP1Q12888 1972 aaPredicted RBP5.02□□□□□ -1.61
HTT-202ENST00000502820 F8P00451 2351 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ARID1BQ8NFD5 2236 aaPredicted RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 TDRD6O60522 2096 aaKnown RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 SETD2Q9BYW2 2564 aaPredicted RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 FAM237BA0A1B0GVD1 139 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 TCRBV7S2A1N4TA0A589 114 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 TMEM191CA6NGB0 347 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 SAGE2PA6NJ88 616 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 TMEM200CA6NKL6 621 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ZNF487B1APH4 448 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 CLDN25C9JDP6 229 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 BOLA2-SMG1P6H3BVE0 249 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 FGF10O15520 208 aaPredicted RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 ATMINO43313 823 aaPredicted RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 KDELR3O43731 214 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 SNX2O60749 519 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 MTRF1O75570 445 aaKnown RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 CLPXO76031 633 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 USP1O94782 785 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 MAP3K6O95382 1288 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 DLGAP3O95886 979 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 GSRP00390 522 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 RBP3P10745 1247 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ATP6V1B1P15313 513 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 JUNBP17275 347 aaPredicted RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 CCNA2P20248 432 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 BGNP21810 368 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 KELP23276 732 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ME2P23368 584 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 MYF6P23409 242 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ITGA3P26006 1051 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 IL12AP29459 219 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 SSTR2P30874 369 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 GRK3P35626 688 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ACTR1BP42025 376 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 GPR3P46089 330 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 NME5P56597 212 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 GPX6P59796 221 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ACTR1AP61163 376 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 SH3BP2P78314 561 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 MPP1Q00013 466 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 TLE4Q04727 773 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 SF3A3Q12874 501 aaKnown RBP eCLIP5.01□□□□□ -1.61
HTT-202ENST00000502820 LLGL1Q15334 1064 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 TESK1Q15569 626 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 CHI3L2Q15782 390 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 PHKG1Q16816 387 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 PARP15Q460N3 678 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 INO80DQ53TQ3 878 aaPredicted RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 UBAP2Q5T6F2 1119 aaKnown RBP5.01□□□□□ -1.61
HTT-202ENST00000502820 FAM69BQ5VUD6 431 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 AFMIDQ63HM1 303 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 LPCAT4Q643R3 524 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 PDPK2PQ6A1A2 396 aa5.01□□□□□ -1.61
HTT-202ENST00000502820 ERAP2Q6P179 960 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms