RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CRYBB3P26998 211 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IDUAP35475 653 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZEB1P37275 1124 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CDKN1BP46527 198 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC9A3P48764 834 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 EEFSECP57772 596 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 PLIN5Q00G26 463 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ALDH6A1Q02252 535 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CIRBPQ14011 172 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 TFDP1Q14186 410 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NECTIN1Q15223 517 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TERF2Q15554 542 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZACNQ401N2 412 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PHLDA2Q53GA4 152 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM177Q53S58 311 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PAN3Q58A45 887 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CYP4A22Q5TCH4 519 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FNDC7Q5VTL7 733 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 RNF219Q5W0B1 726 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 ATG9BQ674R7 924 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TXNRD3NBQ6F5E7 133 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PGBD2Q6P3X8 592 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IYDQ6PHW0 289 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TSSK4Q6SA08 328 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SPNS3Q6ZMD2 512 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM179Q6ZVK1 233 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 USP49Q70CQ1 688 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 UNC13DQ70J99 1090 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GPR180Q86V85 440 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMPRSS12Q86WS5 348 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MICU3Q86XE3 530 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FAM126BQ8IXS8 530 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ABI1Q8IZP0 508 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.38□□□□□ -2.19
XRN1-214ENST00000498077 MARCH10Q8NA82 808 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 MCPH1Q8NEM0 835 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PCDH19Q8TAB3 1148 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TAS1R2Q8TE23 839 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SMAP2Q8WU79 429 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 DYDC1Q8WWB3 177 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 METTL21AQ8WXB1 218 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BORCS5Q969J3 196 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TCEAL4Q96EI5 215 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC47A1Q96FL8 570 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 P2RY13Q9BPV8 354 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TIMM29Q9BSF4 260 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM147Q9BVK8 224 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 THAP2Q9H0W7 228 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GSX1Q9H4S2 264 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 MROH8Q9H579 483 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ATP13A3Q9H7F0 1226 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SIX2Q9NPC8 291 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NANSQ9NR45 359 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 AGPAT3Q9NRZ7 376 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PNPLA3Q9NST1 481 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 HAUS2Q9NVX0 235 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TMEM63CQ9P1W3 806 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ANAPC5Q9UJX4 755 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NAGPAQ9UK23 515 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MAN2B2Q9Y2E5 1009 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CRYL1Q9Y2S2 319 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TAF1LQ8IZX4 1826 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.38□□□□□ -2.194e-9■■■■■ 34.1
XRN1-214ENST00000498077 CEP162Q5TB80 1403 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IGLV3-10A0A075B6K4 115 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NPHP3-ACAD11A0A0J9YXS1 232 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ZFP92A6NM28 416 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SLC28A1O00337 649 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 NTN3O00634 580 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 KPNA5O15131 536 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ADAM20O43506 726 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 N4BP1O75113 896 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 FCN3O75636 299 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ANXA9O76027 345 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 PDE5AO76074 875 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TIAF1O95411 115 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 B3GALT4O96024 378 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ASS1P00966 412 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CHRNGP07510 517 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MELTFP08582 738 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 IFIT2P09913 472 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 UBTFL1P0CB47 393 aaPredicted RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 IFI30P13284 250 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MYL6BP14649 208 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CHN1P15882 459 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MPSTP25325 297 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 YWHABP31946 246 aaKnown RBP1.38□□□□□ -2.19
XRN1-214ENST00000498077 CA5AP35218 305 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 BSGP35613 385 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MNDAP41218 407 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 FNTAP49354 379 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 KLRC3Q07444 240 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ABHD18Q0P651 414 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 MGAT2Q10469 447 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 GALNT2Q10471 571 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 TARDBPQ13148 414 aaKnown RBP eCLIP1.38□□□□□ -2.193e-23■■■■■ 39.5
XRN1-214ENST00000498077 MED22Q15528 200 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 SH3PXD2AQ5TCZ1 1133 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 ERAP2Q6P179 960 aa1.38□□□□□ -2.19
XRN1-214ENST00000498077 CYP2R1Q6VVX0 501 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms