RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CHAF1BQ13112 559 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 PDAP1Q13442 181 aaKnown RBP14.67□□□□□ -0.06
NUP50-219ENST00000497960 SSPNQ14714 243 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 SLC9A5Q14940 896 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 GRTP1Q5TC63 336 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 THEMIS2Q5TEJ8 643 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 HECTD2Q5U5R9 776 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 ICE2Q659A1 982 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 CPZQ66K79 652 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 ASB18Q6ZVZ8 466 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 RNF44Q7L0R7 432 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 TAOK1Q7L7X3 1001 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 MYO1HQ8N1T3 1032 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 TMEM102Q8N9M5 508 aaPredicted RBP14.67□□□□□ -0.06
NUP50-219ENST00000497960 ZNF480Q8WV37 535 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 PAFAH2Q99487 392 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 ZFYVE21Q9BQ24 234 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 PLCD4Q9BRC7 762 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 ENAMQ9NRM1 1142 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 ABCF3Q9NUQ8 709 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 G3BP2Q9UN86 482 aaKnown RBP14.67□□□□□ -0.06
NUP50-219ENST00000497960 ANKRD12Q6UB98 2062 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 FITM1A5D6W6 292 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 E7ENX8 843 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 POC1B-GALNT4F8VUJ3 575 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 FAM155BO75949 473 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 EIF2S1P05198 315 aaKnown RBP14.66□□□□□ -0.06
NUP50-219ENST00000497960 C8GP07360 202 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 GCGRP47871 477 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 SLC12A2P55011 1212 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 CDKN2DP55273 166 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 TAP2Q03519 686 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 KLRB1Q12918 225 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 SP140Q13342 867 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 SLC29A2Q14542 456 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 MRPL14Q6P1L8 145 aaKnown RBP14.66□□□□□ -0.06
NUP50-219ENST00000497960 PAQR3Q6TCH7 311 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 MED25Q71SY5 747 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 SPNS2Q8IVW8 549 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 PPFIBP2Q8ND30 876 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 OR2Y1Q8NGV0 311 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 EEF1AKMT1Q8WVE0 214 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 CAVIN3Q969G5 261 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 FKBP10Q96AY3 582 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 PTERQ96BW5 349 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 LINGO1Q96FE5 620 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 SLC25A23Q9BV35 468 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 SLC6A20Q9NP91 592 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 VWA7Q9Y334 891 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 NBASA2RRP1 2371 aa14.66□□□□□ -0.06
NUP50-219ENST00000497960 GCN1Q92616 2671 aaKnown RBP14.65□□□□□ -0.06
NUP50-219ENST00000497960 LOC105369274A0A096LPK9 316 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 LOC102723532A0A0G2JNH3 316 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 HYKKA2RU49 373 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 PABPN1LA6NDY0 278 aaKnown RBP14.65□□□□□ -0.06
NUP50-219ENST00000497960 PEX12O00623 359 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 SLC16A5O15375 505 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 ERLIN1O75477 346 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 IGHEP01854 428 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 ALBP02768 609 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 HIST1H2AGP0C0S8 130 aaPredicted RBP14.65□□□□□ -0.06
NUP50-219ENST00000497960 NR1D1P20393 614 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 HIST1H2ADP20671 130 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 FDXRP22570 491 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 IMPA1P29218 277 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 CASRP41180 1078 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 MSH2P43246 934 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 PGDP52209 483 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 IL2P60568 153 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 YBX1P67809 324 aaKnown RBP14.65□□□□□ -0.06
NUP50-219ENST00000497960 TIAL1Q01085 375 aaKnown RBP eCLIP14.65□□□□□ -0.06
NUP50-219ENST00000497960 ATP1A4Q13733 1029 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 FRMPD2BQ6IN97 320 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 FBXO42Q6P3S6 717 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 OVCH1Q7RTY7 1134 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 ADCK2Q7Z695 626 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 MRGPREQ86SM8 312 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 PAQR7Q86WK9 346 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 OR4N4Q8N0Y3 316 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 TEX19Q8NA77 164 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 SLC44A1Q8WWI5 657 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 RERGQ96A58 199 aaPredicted RBP14.65□□□□□ -0.06
NUP50-219ENST00000497960 TSPAN17Q96FV3 270 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 HIST1H2AHQ96KK5 128 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 FER1L6-AS2Q96M78 137 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 CCDC138Q96M89 665 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 GPR22Q99680 433 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 OLFM1Q99784 485 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 HIST1H2AJQ99878 128 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 H2AFJQ9BTM1 129 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 TRIM4Q9C037 500 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 EPB41L4BQ9H329 900 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 PARVBQ9HBI1 364 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 PCDHGA9Q9Y5G4 932 aaKnown RBP14.65□□□□□ -0.06
NUP50-219ENST00000497960 BOD1L1Q8NFC6 3051 aa14.65□□□□□ -0.06
NUP50-219ENST00000497960 HEATR5BQ9P2D3 2071 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 H0YGG7 62 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 PYCARD-AS1I3L0S3 204 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 K7EM74 188 aa14.64□□□□□ -0.07
NUP50-219ENST00000497960 NRP2O60462 931 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms