RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CDK9P50750 372 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NDST2P52849 883 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PRMT2P55345 433 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SOX10P56693 466 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NUP107P57740 925 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTBP60709 375 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTA2P62736 377 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RAB1AP62820 205 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTG1P63261 375 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTG2P63267 376 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTC1P68032 377 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ACTA1P68133 377 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CCZ1BP86790 482 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CCZ1P86791 482 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GALK2Q01415 458 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 DEFA6Q01524 100 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRC63Q05C16 580 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TGM3Q08188 693 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 OVGP1Q12889 678 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TSPAN31Q12999 210 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PDCLQ13371 301 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 C16orf72Q14CZ0 275 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TRAM2Q15035 370 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 DECR1Q16698 335 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM214AQ32MH5 1076 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZIK1Q3SY52 487 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRC24Q50LG9 513 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZRANB3Q5FWF4 1079 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PLAC9Q5JTB6 97 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 AGBL2Q5U5Z8 902 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 GPR107Q5VW38 600 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CYB5R2Q6BCY4 276 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 OR5M10Q6IEU7 315 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CES3Q6UWW8 571 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NPSR1Q6W5P4 371 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM83HQ6ZRV2 1179 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC117Q8IWD4 279 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CDK20Q8IZL9 346 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NLGN4XQ8N0W4 816 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CA5BP1Q8WTZ4 195 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LARP4BQ92615 738 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 UFD1Q92890 307 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SGTBQ96EQ0 304 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 BOD1Q96IK1 185 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LRIG1Q96JA1 1093 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FDXACB1Q9BRP7 624 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF577Q9BSK1 485 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TPPP3Q9BW30 176 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF416Q9BWM5 594 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC25A18Q9H1K4 315 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ARMC7Q9H6L4 198 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RMND5AQ9H871 391 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ANKZF1Q9H8Y5 726 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 BARX1Q9HBU1 254 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PRDM8Q9NQV8 689 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 DUSP22Q9NRW4 184 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PNO1Q9NRX1 252 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RGS18Q9NS28 235 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MAN2C1Q9NTJ4 1040 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RBM12Q9NTZ6 932 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 HCFC1R1Q9NWW0 138 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 BARHL2Q9NY43 387 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 IGSF9Q9P2J2 1179 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ERVK-18Q9QC07 812 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 RGS17Q9UGC6 210 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ARMCX3Q9UH62 379 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 BTNL2Q9UIR0 455 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 HSF4Q9ULV5 492 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ADAMTS5Q9UNA0 930 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 COPS3Q9UNS2 423 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ERVW-1Q9UQF0 538 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LIPT1Q9Y234 373 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 B3GNT3Q9Y2A9 372 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 KCNE2Q9Y6J6 123 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGI1Q96QZ7 1491 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NCANO14594 1321 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FHOD3Q2V2M9 1422 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 A0A0A6YYH2 397 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 A0A0J9YYE9 177 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC160A6NGH7 325 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 A6NJ64 397 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 MEI4A8MW99 385 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM238C9JI98 176 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM86B1E9PN63 330 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 H7C1D1 291 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC188H7C350 402 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NR5A2O00482 541 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 ADAMDEC1O15204 470 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PRPF4O43172 522 aaKnown RBP eCLIP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TOM1O60784 492 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TRMUO75648 421 aaKnown RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 NXPH2O95156 264 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 TRBC1P01850 177 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PCCBP05166 539 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SERPINA6P08185 405 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 CTXN2P0C2S0 81 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC2A1P11166 492 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 PIM1P11309 404 aaPredicted RBP3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 COX4I1P13073 169 aa3.01□□□□□ -1.93
SNRNP48-202ENST00000496946 LAP3P28838 519 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms