RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 RASGEF1BQ0VAM2 473 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 FASTKD3Q14CZ7 662 aaKnown RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 NONOQ15233 471 aaKnown RBP eCLIP3.17□□□□□ -1.9
CD46-218ENST00000496723 CST9LP1Q5W188 147 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 IL17RELQ6ZVW7 336 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 MFN1Q8IWA4 741 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 SPAG16Q8N0X2 631 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 ANKRD13CQ8N6S4 541 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 TDRD5Q8NAT2 981 aaKnown RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 NUP37Q8NFH4 326 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 GTF3AQ92664 365 aaKnown RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 SPSB1Q96BD6 273 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 CFAP57Q96MR6 1250 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 ZNF558Q96NG5 402 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 LRRC3BQ96PB8 259 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 ZNF300Q96RE9 604 aaPredicted RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 LRRC61Q9BV99 259 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.17□□□□□ -1.9
CD46-218ENST00000496723 TEX10Q9NXF1 929 aaPredicted RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 MOB4Q9Y3A3 225 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 MYH14Q7Z406 1995 aaKnown RBP3.17□□□□□ -1.9
CD46-218ENST00000496723 PCNX3Q9H6A9 2034 aa3.17□□□□□ -1.9
CD46-218ENST00000496723 MPTX1A8MV57 137 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CCL24O00175 119 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 SOCS3O14543 225 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 PI15O43692 258 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 IDH3BO43837 385 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 GGPS1O95749 300 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 ALDH1B1P30837 517 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 SOX3P41225 446 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CLDN15P56746 228 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 UBASH3AP57075 661 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 DSCR10P59022 87 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CALCOCO2Q13137 446 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 NFATC2Q13469 925 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CDH18Q13634 790 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 TRIM29Q14134 588 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 TMEM132DQ14C87 1099 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 RASA2Q15283 850 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 PTPN14Q15678 1187 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 KYNUQ16719 465 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 MTHFSDQ2M296 383 aaKnown RBP3.16□□□□□ -1.9
CD46-218ENST00000496723 MOGAT2Q3SYC2 334 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CES4AQ5XG92 561 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 KRT80Q6KB66 452 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 SLC30A6Q6NXT4 461 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CTR9Q6PD62 1173 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 PAQR6Q6TCH4 344 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 KIF6Q6ZMV9 814 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 CATSPERDQ86XM0 798 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 PI4KAP1Q8N8J0 262 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 PRSS33Q8NF86 280 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 OR6J1Q8NGC5 347 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 METTL21AQ8WXB1 218 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 PIK3R3Q92569 461 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 TXLNGYQ9BZA5 131 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 TMX4Q9H1E5 349 aaPredicted RBP3.16□□□□□ -1.9
CD46-218ENST00000496723 MED20Q9H944 212 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.16□□□□□ -1.9
CD46-218ENST00000496723 IGSF1Q8N6C5 1336 aa3.16□□□□□ -1.9
CD46-218ENST00000496723 TRAV24A0A0B4J272 114 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 IGKV6D-41A0A0C4DH26 115 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 TRBV4-1A0A0J9YWV2 114 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 C2CD4DB7Z1M9 353 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 UBE2CO00762 179 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 KRT33AO76009 404 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 TMEM50BP56557 158 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 MS4A2Q01362 244 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 ILF2Q12905 390 aaKnown RBP3.15□□□□□ -1.91
CD46-218ENST00000496723 ELAVL2Q12926 359 aaKnown RBP3.15□□□□□ -1.91
CD46-218ENST00000496723 SGCGQ13326 291 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 OPCMLQ14982 345 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 TAB1Q15750 504 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 GLIPR1L2Q4G1C9 344 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 NOTUMQ6P988 496 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 FCRLAQ7L513 359 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 KRT74Q7RTS7 529 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 FAM89BQ8N5H3 189 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 Q8NBF4 154 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 TSACCQ96A04 125 aaPredicted RBP3.15□□□□□ -1.91
CD46-218ENST00000496723 RMDN1Q96DB5 314 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 C2orf48Q96LS8 159 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 GPATCH1Q9BRR8 931 aaKnown RBP3.15□□□□□ -1.91
CD46-218ENST00000496723 XAB2Q9HCS7 855 aaKnown RBP3.15□□□□□ -1.91
CD46-218ENST00000496723 B3GAT2Q9NPZ5 323 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 NKIRAS2Q9NYR9 191 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 KLK13Q9UKR3 277 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 TTLL3Q9Y4R7 772 aa3.15□□□□□ -1.91
CD46-218ENST00000496723 PI4K2BG5E9Z4 385 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 BAG3O95817 575 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 DNTTP04053 509 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 FYNP06241 537 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 GATA1P15976 413 aaPredicted RBP3.14□□□□□ -1.91
CD46-218ENST00000496723 ERCC2P18074 760 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 BDNFP23560 247 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 ELAVL4P26378 380 aaKnown RBP3.14□□□□□ -1.91
CD46-218ENST00000496723 SHC1P29353 583 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 RBMS1P29558 406 aaKnown RBP3.14□□□□□ -1.91
CD46-218ENST00000496723 HSPA4P34932 840 aa3.14□□□□□ -1.91
CD46-218ENST00000496723 KRT20P35900 424 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms