RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 DEFB110Q30KQ9 67 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 XKR6Q5GH73 641 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 ATG9BQ674R7 924 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 SLCO4C1Q6ZQN7 724 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 FRMD7Q6ZUT3 714 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 RNF44Q7L0R7 432 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 NUDCD3Q8IVD9 361 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 D2HGDHQ8N465 521 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 PPP1R14CQ8TAE6 165 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 ATP6V1E2Q96A05 226 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 PTCD3Q96EY7 689 aaKnown RBP17.61■□□□□ 0.41
TSSC4-210ENST00000496468 AIF1LQ9BQI0 150 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 CHRNA10Q9GZZ6 450 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 EHD1Q9H4M9 534 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 GSTO2Q9H4Y5 243 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 NOL11Q9H8H0 719 aaKnown RBP17.61■□□□□ 0.41
TSSC4-210ENST00000496468 IPPKQ9H8X2 491 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 ACTR8Q9H981 624 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 FANCEQ9HB96 536 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 TMEM184CQ9NVA4 438 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 STK38LQ9Y2H1 464 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 LOXL2Q9Y4K0 774 aa17.61■□□□□ 0.41
TSSC4-210ENST00000496468 DCHS1Q96JQ0 3298 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 PTPRBP23467 1997 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CCDC187A0A096LP49 1063 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 WDR91A4D1P6 747 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 FAM149AA5PLN7 773 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 EFCAB7A8K855 629 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 H3BQF6 201 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 MLYCDO95822 493 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 NEFHP12036 1026 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 VARSP26640 1264 aaKnown RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CDH13P55290 713 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 WDR4P57081 412 aaKnown RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CSNK1G2P78368 415 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CLCQ05315 142 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CYP4F3Q08477 520 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 FOXC1Q12948 553 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 LCP2Q13094 533 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 TARDBPQ13148 414 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CHIT1Q13231 466 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 EIF3IQ13347 325 aaKnown RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 SLBPQ14493 270 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CYB5D1Q6P9G0 228 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 TMPRSS7Q7RTY8 843 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 MYLK4Q86YV6 388 aaPredicted RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CHCHD4Q8N4Q1 142 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 TBC1D19Q8N5T2 526 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 OR52B6Q8NGF0 335 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 TRPC4APQ8TEL6 797 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 N4BP2L2Q92802 583 aaPredicted RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 ZFYVE21Q9BQ24 234 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 EFCAB11Q9BUY7 163 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 GATA5Q9BWX5 397 aaPredicted RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 ZBTB26Q9HCK0 441 aa17.6■□□□□ 0.41
TSSC4-210ENST00000496468 SIDT1Q9NXL6 827 aaKnown RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 CNOT1A5YKK6 2376 aaKnown RBP17.6■□□□□ 0.41
TSSC4-210ENST00000496468 OR7A17O14581 309 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 OTCP00480 354 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 C1GALT1C1LP0DN25 315 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 FGF3P11487 239 aaPredicted RBP17.59■□□□□ 0.41
TSSC4-210ENST00000496468 TSPAN8P19075 237 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 RPS15AP62244 130 aaKnown RBP17.59■□□□□ 0.41
TSSC4-210ENST00000496468 SH3BP2P78314 561 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 MEF2AQ02078 507 aaPredicted RBP17.59■□□□□ 0.41
TSSC4-210ENST00000496468 ACY1Q03154 408 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 TRAF3Q13114 568 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 TUBB3Q13509 450 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 DOC2AQ14183 400 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 CHI3L2Q15782 390 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 TBCCQ15814 346 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 ZC3H12BQ5HYM0 836 aaKnown RBP17.59■□□□□ 0.41
TSSC4-210ENST00000496468 PAGE2BQ5JRK9 111 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 ZCCHC23Q6ZST2 131 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 RAB11FIP2Q7L804 512 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 DGLUCYQ7Z3D6 616 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 KRT78Q8N1N4 520 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 OR4K1Q8NGD4 311 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 MOCOSQ96EN8 888 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 WDR34Q96EX3 536 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 ZNF382Q96SR6 550 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 DRC3Q9H069 523 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 SPNS1Q9H2V7 528 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 FAM60AQ9NP50 221 aa17.59■□□□□ 0.41
TSSC4-210ENST00000496468 TRBC2A0A5B9 178 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 FEZF1A0PJY2 475 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 TMEM150CB9EJG8 249 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 HYAL3O43820 417 aaPredicted RBP17.58■□□□□ 0.4
TSSC4-210ENST00000496468 NPHS1O60500 1241 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 UGDHO60701 494 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 CTSVO60911 334 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 MSL3P1P0C860 447 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 JMJD7P0C870 316 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 FOLR1P15328 257 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 CHN1P15882 459 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 CXCR2P25025 360 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 PCDH1Q08174 1060 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 LAPTM5Q13571 262 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 GPR19Q15760 415 aa17.58■□□□□ 0.4
TSSC4-210ENST00000496468 C3orf38Q5JPI3 329 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms