RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CPAMD8Q8IZJ3 1885 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 TCP11X1B4DZS4 312 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 FFAR3O14843 346 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 GPR42O15529 346 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 ALPPP05187 535 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 ZGLP1P0C6A0 271 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 EZRP15311 586 aaKnown RBP13.59□□□□□ -0.23
VTI1A-209ENST00000496445 FBLP22087 321 aaKnown RBP13.59□□□□□ -0.23
VTI1A-209ENST00000496445 EMP3P54852 163 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 TBPL1P62380 186 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 Q0VFX4 171 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 ESPL1Q14674 2120 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 TUBB8Q3ZCM7 444 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 VWA2Q5GFL6 755 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 SPANXN3Q5MJ09 141 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 MBOAT1Q6ZNC8 495 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 PLD3Q8IV08 490 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 PRSS58Q8IYP2 241 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 AMER3Q8N944 861 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 COL26A1Q96A83 441 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 EBNA1BP2Q99848 306 aaKnown RBP13.59□□□□□ -0.23
VTI1A-209ENST00000496445 CRB3Q9BUF7 120 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 ZNF282Q9UDV7 671 aaPredicted RBP13.59□□□□□ -0.23
VTI1A-209ENST00000496445 TRMT6Q9UJA5 497 aaKnown RBP13.59□□□□□ -0.23
VTI1A-209ENST00000496445 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 B3GNT3Q9Y2A9 372 aa13.59□□□□□ -0.23
VTI1A-209ENST00000496445 FOXS1O43638 330 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 ZBTB14O43829 449 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 IPO13O94829 963 aaKnown RBP13.58□□□□□ -0.24
VTI1A-209ENST00000496445 EFNA3P52797 238 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 CDKN2DP55273 166 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 ABATP80404 500 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 MRPL49Q13405 166 aaKnown RBP13.58□□□□□ -0.24
VTI1A-209ENST00000496445 DSG2Q14126 1118 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 CRB2Q5IJ48 1285 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 IGFL2Q6UWQ7 119 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 Q6ZS92 163 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 ADCK2Q7Z695 626 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 CUZD1Q86UP6 607 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 IQCKQ8N0W5 287 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 EEF1AKMT1Q8WVE0 214 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 MIEF2Q96C03 454 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 C8orf44Q96CB5 159 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 SNRNP40Q96DI7 357 aaKnown RBP13.58□□□□□ -0.24
VTI1A-209ENST00000496445 MVB12AQ96EY5 273 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 PSMG3-AS1Q96PY0 264 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 C3orf18Q9UK00 162 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 PDE10AQ9Y233 779 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 MRPS2Q9Y399 296 aaKnown RBP13.58□□□□□ -0.24
VTI1A-209ENST00000496445 PCDHGA10Q9Y5H3 936 aa13.58□□□□□ -0.24
VTI1A-209ENST00000496445 BLACEA4D250 179 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 H7BY64 318 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 KLHL41O60662 606 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 TTC4O95801 387 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 TSPAN12O95859 305 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 AHSGP02765 367 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 STATHP02808 62 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 RNF224P0DH78 156 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 COX6A1P12074 109 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 TCP1P17987 556 aaKnown RBP13.57□□□□□ -0.24
VTI1A-209ENST00000496445 SLC26A3P40879 764 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
VTI1A-209ENST00000496445 PGGT1BP53609 377 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 RELAQ04206 551 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 OCA2Q04671 838 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 HIF1AQ16665 826 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 BBS9Q3SYG4 887 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 ATG9BQ674R7 924 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 PAQR3Q6TCH7 311 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 VN1R4Q7Z5H5 301 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 PCGF5Q86SE9 256 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 CREG2Q8IUH2 290 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 PARP9Q8IXQ6 854 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 SHISA5Q8N114 240 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 TM9SF4Q92544 642 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 CERS2Q96G23 380 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 CAPZA3Q96KX2 299 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 PRAP1Q96NZ9 151 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 WDR77Q9BQA1 342 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-209ENST00000496445 ILKAPQ9H0C8 392 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-209ENST00000496445 CCDC177Q9NQR7 707 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-209ENST00000496445 MAP10Q9P2G4 905 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 NTNG1Q9Y2I2 539 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 ICE1Q9Y2F5 2266 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 UNC79Q9P2D8 2635 aa13.57□□□□□ -0.24
VTI1A-209ENST00000496445 DOPEY1Q5JWR5 2465 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 A0A0A6YYC8 382 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-209ENST00000496445 A0A1W2PQ72 361 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 IDSB3KWA1 339 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 I3L1I5 382 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-209ENST00000496445 MAP2K7O14733 419 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 FANCGO15287 622 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 TP73O15350 636 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 SEMA7AO75326 666 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 HPP00738 406 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 C8GP07360 202 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 ACPPP15309 386 aa13.56□□□□□ -0.24
VTI1A-209ENST00000496445 ELK3P41970 407 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms