RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 RELBQ01201 579 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 MS4A2Q01362 244 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 HMGCS1Q01581 520 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CHRNB3Q05901 458 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CYP4F3Q08477 520 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 HYAL1Q12794 435 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CNTN1Q12860 1018 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 DDX39BQ13838 428 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 KRT33BQ14525 404 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ARHGAP19Q14CB8 494 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CYP51A1Q16850 503 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 GAB4Q2WGN9 574 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PLA2G4EQ3MJ16 856 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 RFTN2Q52LD8 501 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 PRAMEF14Q5SWL7 426 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 TMTC4Q5T4D3 741 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ANXA8L1Q5VT79 327 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ATG9BQ674R7 924 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 NANOGP8Q6NSW7 305 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PNCKQ6P2M8 343 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ERICH5Q6P6B1 374 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 TMEM154Q6P9G4 183 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 DOK6Q6PKX4 331 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 SLC2A7Q6PXP3 512 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CRTC3Q6UUV7 619 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 LCTLQ6UWM7 567 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 ERMP1Q7Z2K6 904 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 R3HCC1LQ7Z5L2 792 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 HEATR4Q86WZ0 1026 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 VRK3Q8IV63 474 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 FAM156AQ8NDB6 213 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 OR2T12Q8NG77 320 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 NCLNQ969V3 563 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 FAM162AQ96A26 154 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 VOPP1Q96AW1 172 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PYCR2Q96C36 320 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 MTFMTQ96DP5 389 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 FAM120BQ96EK7 910 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 MSANTD3Q96H12 275 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 SLC45A3Q96JT2 553 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 LRRC3BQ96PB8 259 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 FAM129BQ96TA1 746 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PKP4Q99569 1192 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 SLC39A3Q9BRY0 314 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 BDH2Q9BUT1 245 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 THUMPD3Q9BV44 507 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 SPATA9Q9BWV2 254 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 OSBPL11Q9BXB4 747 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PITHD1Q9GZP4 211 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 PCDHAC1Q9H158 963 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 TRIT1Q9H3H1 467 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 RAD21L1Q9H4I0 556 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 EHD1Q9H4M9 534 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 C8orf33Q9H7E9 229 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 NANOGQ9H9S0 305 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 PREBQ9HCU5 417 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CCM2LQ9NUG4 571 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 ATXN10Q9UBB4 475 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 EGFL7Q9UHF1 273 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ACSL5Q9ULC5 683 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CNOT6Q9ULM6 557 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 PCDHGB4Q9UN71 923 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 INVSQ9Y283 1065 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 NINQ8N4C6 2090 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 TDRD6O60522 2096 aaKnown RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 RNF103-CHMP3A0A140T963 221 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 GNG14A0A1W2PPG7 69 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ARHGAP10A1A4S6 786 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ELOVL7A1L3X0 281 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 C9JVG2 144 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 E7EQ34 232 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 FXYD1O00168 92 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 RFXANKO14593 260 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 SCELO95171 688 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 CCNDBP1O95273 360 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 TNFAIP8O95379 198 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 SLC16A8O95907 504 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 C1GALT1C1LP0DN25 315 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 MYCLP1P12525 358 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 HOXB2P14652 356 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ZNF8P17098 575 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 SDC1P18827 310 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 DRD1P21728 446 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 GPC1P35052 558 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 MSX2P35548 267 aaPredicted RBP6.69□□□□□ -1.34
USP39-219ENST00000496047 RXRGP48443 463 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 TRPC1P48995 793 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 AQP4P55087 323 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 CDK3Q00526 305 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 GRSF1Q12849 480 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP39-219ENST00000496047 EPS8Q12929 822 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 ENPP2Q13822 863 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 DOC2AQ14183 400 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 PGS1Q32NB8 556 aa6.69□□□□□ -1.34
USP39-219ENST00000496047 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms