RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	SLC18A2	Q05940	514 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	IFFO1	Q0D2I5	559 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	GPR19	Q15760	415 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	LINC00303	Q3SY05	128 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	FBXO48	Q5FWF7	155 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	SULT1C3	Q6IMI6	304 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	FBXO42	Q6P3S6	717 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	LCTL	Q6UWM7	567 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	TRABD2A	Q86V40	505 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	PAQR7	Q86WK9	346 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	CNPY4	Q8N129	248 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	RIBC1	Q8N443	379 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-233	ENST00000496030	USP7	Q93009	1102 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	ZUFSP	Q96AP4	578 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	ESAM	Q96AP7	390 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	ZNF501	Q96CX3	271 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-233	ENST00000496030	TCTN2	Q96GX1	697 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	CABS1	Q96KC9	395 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	DPH7	Q9BTV6	452 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-233	ENST00000496030	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-233	ENST00000496030	SLC39A1	Q9NY26	324 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	PILRA	Q9UKJ1	303 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	EMCN	Q9ULC0	261 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	PCDHGA3	Q9Y5H0	932 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	SDK2	Q58EX2	2172 aa		11.42	□□□□□ -0.58
APTX-233	ENST00000496030	NVL	O15381	856 aa	Known RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PRAMEF4	O60810	478 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	RBP1	P09455	135 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	JMJD7	P0C870	316 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	FGF5	P12034	268 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	GP1BB	P13224	206 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	KRT15	P19012	456 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	EPOR	P19235	508 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	CCND1	P24385	295 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	CMPK1	P30085	196 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	MLLT3	P42568	568 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	AGTR2	P50052	363 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	MAPK10	P53779	464 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	TSTA3	Q13630	321 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	TSNAXIP1	Q2TAA8	658 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	TNFAIP8L3	Q5GJ75	292 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PRAMEF9	Q5VWM5	478 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PRAMEF13	Q5VWM6	474 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	C16orf46	Q6P387	395 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	FOXR1	Q6PIV2	292 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	LRIG3	Q6UXM1	1119 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	FRA10AC1	Q70Z53	315 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	LCA5	Q86VQ0	697 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	THOC6	Q86W42	341 aa	Known RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	FAM129C	Q86XR2	697 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	OR4K1	Q8NGD4	311 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	ZBTB9	Q96C00	473 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	OR6C1	Q96RD1	312 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	TAAR9	Q96RI9	348 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	CTRC	Q99895	268 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	EGFL8	Q99944	293 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	MRPL57	Q9BQC6	102 aa	Known RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PLCD4	Q9BRC7	762 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	DDA1	Q9BW61	102 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	B3GNT4	Q9C0J1	378 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PCBD2	Q9H0N5	130 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PDE7B	Q9NP56	450 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	MRPS30	Q9NP92	439 aa	Known RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	ENAM	Q9NRM1	1142 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	FGF21	Q9NSA1	209 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	ABCF3	Q9NUQ8	709 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	NUDT4	Q9NZJ9	180 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	CD274	Q9NZQ7	290 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	FOXJ2	Q9P0K8	574 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	AKAP7	Q9P0M2	348 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-233	ENST00000496030	XPR1	Q9UBH6	696 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	SLC22A14	Q9Y267	594 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	PCDHGA7	Q9Y5G6	932 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	B3GALT1	Q9Y5Z6	326 aa		11.41	□□□□□ -0.58
APTX-233	ENST00000496030	LRRC14B	A6NHZ5	514 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SUPT3H	B4E1H0	165 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030		H7BY64	318 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SUV39H1	O43463	412 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SUPT3H	O75486	399 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	TIAF1	O95411	115 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	GSTA1	P08263	222 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	CREB1	P16220	341 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	KRT4	P19013	534 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SLC5A2	P31639	672 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	CRHR1	P34998	444 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	HSPA7	P48741	367 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	ARL4D	P49703	201 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	CSNK1G2	P78368	415 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	RELA	Q04206	551 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	TUBB3	Q13509	450 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	IL11RA	Q14626	422 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	SETDB1	Q15047	1291 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	THEMIS2	Q5TEJ8	643 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	KLC3	Q6P597	504 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	ATG14	Q6ZNE5	492 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	MCAT	Q8IVS2	390 aa	Known RBP	11.4	□□□□□ -0.58
APTX-233	ENST00000496030	LSMEM2	Q8N112	164 aa		11.4	□□□□□ -0.58
APTX-233	ENST00000496030	TCAIM	Q8N3R3	496 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms