RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ZNF655Q8N720 491 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-212ENST00000495497 SLC5A11Q8WWX8 675 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 NKD1Q969G9 470 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 NEIL2Q969S2 332 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 ZFYVE21Q9BQ24 234 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 AKIRIN1Q9H9L7 192 aaPredicted RBP18.61■□□□□ 0.57
HDAC4-212ENST00000495497 CPSF2Q9P2I0 782 aaKnown RBP18.61■□□□□ 0.57
HDAC4-212ENST00000495497 XPR1Q9UBH6 696 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 ZFHX4Q86UP3 3567 aa18.61■□□□□ 0.57
HDAC4-212ENST00000495497 SDK2Q58EX2 2172 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 LRRC14BA6NHZ5 514 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 SRRM3A6NNA2 597 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-212ENST00000495497 SYCE1LA8MT33 242 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 H0YGG7 62 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 CCNT2O60583 730 aaKnown RBP18.6■□□□□ 0.57
HDAC4-212ENST00000495497 CDH16O75309 829 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 STK16O75716 305 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 STATHP02808 62 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 RBP1P09455 135 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 SBK3P0C264 359 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 ATXN8OSP0DMR3 200 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 VARSP26640 1264 aaKnown RBP18.6■□□□□ 0.57
HDAC4-212ENST00000495497 ARF3P61204 181 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-212ENST00000495497 PFKFB4Q16877 469 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 SH2D5Q6ZV89 423 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 VASH2Q86V25 355 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 SPACA3Q8IXA5 215 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 CACNA2D3Q8IZS8 1091 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 NLGN4XQ8N0W4 816 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 NLGN4YQ8NFZ3 816 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-212ENST00000495497 CD244Q9BZW8 370 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 SPNS1Q9H2V7 528 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 ACTR5Q9H9F9 607 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-212ENST00000495497 DNAJC11Q9NVH1 559 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 TMEM216Q9P0N5 145 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 PCDHB3Q9Y5E6 796 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 LAMA5O15230 3695 aa18.6■□□□□ 0.57
HDAC4-212ENST00000495497 TK2O00142 265 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 ZSCAN9O15535 394 aaPredicted RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 RRP8O43159 456 aaKnown RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 LCMT2O60294 686 aaKnown RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 CPNE3O75131 537 aaKnown RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 GFAPP14136 432 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 EZRP15311 586 aaKnown RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 HRH2P25021 359 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 GPS2Q13227 327 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 RASA2Q15283 850 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 WASHC2DQ5SRD0 308 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 FAM199XQ6PEV8 388 aaPredicted RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 TMPRSS11BQ86T26 416 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 TMEM151AQ8N4L1 468 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 SNX31Q8N9S9 440 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 ACMSDQ8TDX5 336 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 CLIP3Q96DZ5 547 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 ZNF285Q96NJ3 590 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 OR2A5Q96R48 311 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 ROPN1BQ9BZX4 212 aaPredicted RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 SLC7A5P2Q9GIP4 190 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 CNOT10Q9H9A5 744 aaKnown RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 ROPN1Q9HAT0 212 aaPredicted RBP18.59■□□□□ 0.57
HDAC4-212ENST00000495497 KCNE2Q9Y6J6 123 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 DMXL2Q8TDJ6 3036 aa18.59■□□□□ 0.57
HDAC4-212ENST00000495497 APC2O95996 2303 aa18.58■□□□□ 0.57
HDAC4-212ENST00000495497 PCM1Q15154 2024 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 LOC101059948A0A1B0GTJ6 334 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 CCDC189A1A4V9 331 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 KLK8O60259 260 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 SRPX2O60687 465 aaPredicted RBP18.58■□□□□ 0.56
HDAC4-212ENST00000495497 IPO13O94829 963 aaKnown RBP18.58■□□□□ 0.56
HDAC4-212ENST00000495497 BCL6P41182 706 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 CCR8P51685 355 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 CDC16Q13042 620 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 C1orf189Q5VU69 101 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 LCN10Q6JVE6 187 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 NXPE4Q6UWF7 544 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 LRRC69Q6ZNQ3 347 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 C4orf33Q8N1A6 199 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 DTWD1Q8N5C7 304 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 IL22RA1Q8N6P7 574 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 ZNF740Q8NDX6 193 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 ABHD11Q8NFV4 315 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 OR4K1Q8NGD4 311 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 PHF21BQ96EK2 531 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 MACROD1Q9BQ69 325 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 MRPL57Q9BQC6 102 aaKnown RBP18.58■□□□□ 0.56
HDAC4-212ENST00000495497 DPH1Q9BZG8 443 aa18.58■□□□□ 0.56
HDAC4-212ENST00000495497 DHCR7Q9UBM7 475 aaKnown RBP18.58■□□□□ 0.56
HDAC4-212ENST00000495497 ACACBO00763 2458 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 P2RX6O15547 441 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 PRAMEF4O60810 478 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 ERLIN1O75477 346 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 SIX3O95343 332 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-212ENST00000495497 MED26O95402 600 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 ATP1A2P50993 1020 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 ZNF844Q08AG5 666 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 SETDB1Q15047 1291 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 HKDC1Q2TB90 917 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 TCTE1Q5JU00 501 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 PRAMEF9Q5VWM5 478 aa18.57■□□□□ 0.56
HDAC4-212ENST00000495497 TLDC1Q6P9B6 456 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms