RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PAQR7Q86WK9 346 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 PLD6Q8N2A8 252 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 RIBC1Q8N443 379 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 MREGQ8N565 214 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 ZNF655Q8N720 491 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 SNX31Q8N9S9 440 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 OR2W6PQ8NHA6 318 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 NKD1Q969G9 470 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 NEIL2Q969S2 332 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 KIAA1143Q96AT1 154 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 NLNQ9BYT8 704 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 ROPN1BQ9BZX4 212 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 SPRTNQ9H040 489 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 ROPN1Q9HAT0 212 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 DNAJC11Q9NVH1 559 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 DCDC2Q9UHG0 476 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 PTBP2Q9UKA9 531 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 PADI1Q9ULC6 663 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 TMCO1Q9UM00 188 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 SRPK3Q9UPE1 567 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 PLAAQ9Y263 795 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 ANGPTL3Q9Y5C1 460 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 LAMA5O15230 3695 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 SDK2Q58EX2 2172 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 A0A087WV48 116 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 TEX51A0A1B0GUA7 166 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 TXNDC9O14530 226 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 MAP2K7O14733 419 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 HAT1O14929 419 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 CLGNO14967 610 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 TAPBPO15533 448 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 HCRTR1O43613 425 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 H2AFYO75367 372 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 DLGAP3O95886 979 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 PYGBP11216 843 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 AGXTP21549 392 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ALAS2P22557 587 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 SLC6A12P48065 614 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 GABRA4P48169 554 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 KCNC1P48547 511 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ALDH18A1P54886 795 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 UCNP55089 124 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ABHD18Q0P651 414 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 CDC16Q13042 620 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 TGIF1Q15583 401 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 PFKFB4Q16877 469 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ZXDCQ2QGD7 858 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 FAM214AQ32MH5 1076 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 C18orf21Q32NC0 220 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 FBXO48Q5FWF7 155 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 TECRLQ5HYJ1 363 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 WASHC2DQ5SRD0 308 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 YOD1Q5VVQ6 348 aaPredicted RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 FRMPD2BQ6IN97 320 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 FBXO42Q6P3S6 717 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 LRRC70Q7Z2Q7 622 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 DTX1Q86Y01 620 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 SPACA3Q8IXA5 215 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ZSCAN1Q8NBB4 408 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 MR1Q95460 341 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 GPR78Q96P69 363 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 OR4K3Q96R72 315 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 MRPL57Q9BQC6 102 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 AIF1LQ9BQI0 150 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 EFHD1Q9BUP0 239 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 CD244Q9BZW8 370 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 SPRY4Q9C004 299 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 MRPL46Q9H2W6 279 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 PRM3Q9NNZ6 103 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ZNF358Q9NW07 568 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 GPRC5BQ9NZH0 403 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 XPR1Q9UBH6 696 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 NDOR1Q9UHB4 597 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 TNPO3Q9Y5L0 923 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 ACACAQ13085 2346 aa11.57□□□□□ -0.56
CSNK1E-213ENST00000495232 HEATR5BQ9P2D3 2071 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 ZFHX4Q86UP3 3567 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 SRRM3A6NNA2 597 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 H0YGG7 62 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 K7EPI3 171 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 OR1F1O43749 312 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 NRP2O60462 931 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 GSTA1P08263 222 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 TAC1P20366 129 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 CXCR2P25025 360 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 CCT5P48643 541 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 ARF3P61204 181 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 CSNK1G2P78368 415 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 PDK4Q16654 411 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 CATSPEREQ5SY80 951 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 PRAMEF17Q5VTA0 474 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 RHBDD2Q6NTF9 364 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 NXPE4Q6UWF7 544 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 TIPARPQ7Z3E1 657 aaKnown RBP11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 PLD3Q8IV08 490 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 KLHDC8AQ8IYD2 350 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 CSNK1A1LQ8N752 337 aa11.56□□□□□ -0.56
CSNK1E-213ENST00000495232 ABHD11Q8NFV4 315 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms