RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CYP2A13Q16696 494 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 SPIN4Q56A73 249 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 PAGE2BQ5JRK9 111 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 C10orf62Q5T681 223 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 METRNLQ641Q3 311 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 OR4F3Q6IEY1 312 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 NXPE4Q6UWF7 544 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 VN1R5Q7Z5H4 357 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CAMKMTQ7Z624 323 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 AMIGO2Q86SJ2 522 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 ANKRD46Q86W74 232 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 RALGPS2Q86X27 583 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CALHM3Q86XJ0 350 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 PROSER1Q86XN7 944 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 PAPD5Q8NDF8 572 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 OR5K2Q8NHB8 316 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 OR14C36Q8NHC7 312 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 GANCQ8TET4 914 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 TFGQ92734 400 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 DNASE1L2Q92874 299 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 GATA6Q92908 595 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 RAD51AP1Q96B01 352 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 AURKBQ96GD4 344 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 ITCHQ96J02 903 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 NSMCE2Q96MF7 247 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 NR1H4Q96RI1 486 aaPredicted RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 NRTNQ99748 197 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 C1QTNF7Q9BXJ2 289 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 REXO4Q9GZR2 422 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 RMND5AQ9H871 391 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 FZD3Q9NPG1 666 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CD93Q9NPY3 652 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 WASH6PQ9NQA3 447 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 TRPV5Q9NQA5 729 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 BATF3Q9NR55 127 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 AGPAT4Q9NRZ5 378 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 SIRT5Q9NXA8 310 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CD207Q9UJ71 328 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 ANAPC2Q9UJX6 822 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 CNOT11Q9UKZ1 510 aaKnown RBP10.27□□□□□ -0.77
CLCN6-208ENST00000494028 FZD4Q9ULV1 537 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 AURKCQ9UQB9 309 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 SLC17A4Q9Y2C5 497 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 TSC22D4Q9Y3Q8 395 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 MTCH2Q9Y6C9 303 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 AK5Q9Y6K8 562 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 FANCMQ8IYD8 2048 aa10.27□□□□□ -0.77
CLCN6-208ENST00000494028 A0A1W2PPV9 198 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 FOXE1O00358 373 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 AKAP10O43572 662 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 SCN2BO60939 215 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 SMNDC1O75940 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 FUCA1P04066 466 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 RPN2P04844 631 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 UBTFL6P0CB48 400 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 PIM1P11309 404 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 BMP2P12643 396 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 ZNF26P17031 533 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 PRPS1L1P21108 318 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 PKLRP30613 574 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 SOX11P35716 441 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 HPCAL1P37235 193 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 KIR3DL1P43629 444 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 HSPA13P48723 471 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 GZMMP51124 257 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 KIAA1024LP59773 190 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 MEF2AQ02078 507 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 SLC14A1Q13336 389 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 ARHGAP19Q14CB8 494 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 CYP51A1Q16850 503 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 HKDC1Q2TB90 917 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 AASDHQ4L235 1098 aaPredicted RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 PYCR3Q53H96 274 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 IER5LQ5T953 404 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 CAPRIN2Q6IMN6 1127 aaKnown RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 ARMCX6Q7L4S7 300 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 FAM129CQ86XR2 697 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 MICU2Q8IYU8 434 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 C10orf111Q8N326 155 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 TMEM132CQ8N3T6 1108 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 MARVELD2Q8N4S9 558 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 PHC3Q8NDX5 983 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 GPR156Q8NFN8 814 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 OR2T12Q8NG77 320 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 OR7A2PQ8NGA2 310 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 CDC26Q8NHZ8 85 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 CHTF18Q8WVB6 975 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 STARD8Q92502 1023 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 GFM2Q969S9 779 aaKnown RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 ZNF597Q96LX8 424 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 ZNF583Q96ND8 569 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 MYOCQ99972 504 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 HAUS8Q9BT25 410 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 SEMA6AQ9H2E6 1030 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 VCXQ9H320 206 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 TRIT1Q9H3H1 467 aaKnown RBP10.26□□□□□ -0.77
CLCN6-208ENST00000494028 PIF1Q9H611 641 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 RMI1Q9H9A7 625 aa10.26□□□□□ -0.77
CLCN6-208ENST00000494028 CARS2Q9HA77 564 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms