RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PDRG1Q9NUG6 133 aa5.65□□□□□ -1.51
SMC2-205ENST00000493955 ISY1Q9ULR0 285 aaKnown RBP5.65□□□□□ -1.51
SMC2-205ENST00000493955 PLSCR5A0PG75 271 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 C5orf51A6NDU8 294 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 APOHP02749 345 aaPredicted RBP5.64□□□□□ -1.51
SMC2-205ENST00000493955 NR3C1P04150 777 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 ALPLP05186 524 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 SP9P0CG40 484 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 GAP43P17677 238 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 EFNA1P20827 205 aaPredicted RBP5.64□□□□□ -1.51
SMC2-205ENST00000493955 SSTR1P30872 391 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 CSTF2P33240 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMC2-205ENST00000493955 GLIPR1P48060 266 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 UCP2P55851 309 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 STARD6P59095 220 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 DMP1Q13316 513 aaPredicted RBP5.64□□□□□ -1.51
SMC2-205ENST00000493955 MAPK11Q15759 364 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 SLC35D3Q5M8T2 416 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 KCTD11Q693B1 232 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 FUT10Q6P4F1 479 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 ANO5Q75V66 913 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 RNASE8Q8TDE3 154 aaKnown RBP5.64□□□□□ -1.51
SMC2-205ENST00000493955 LRRC8CQ8TDW0 803 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 DOCK7Q96N67 2140 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 DUX5Q96PT3 197 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 RASL10BQ96S79 203 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 CCDC3Q9BQI4 270 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 ZPBPQ9BS86 351 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 UBQLN3Q9H347 655 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 RIMS4Q9H426 269 aaPredicted RBP5.64□□□□□ -1.51
SMC2-205ENST00000493955 CUEDC2Q9H467 287 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 DDX31Q9H8H2 851 aaKnown RBP5.64□□□□□ -1.51
SMC2-205ENST00000493955 GPR173Q9NS66 373 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 FETUBQ9UGM5 382 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 MAD2L2Q9UI95 211 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 KIAA1217Q5T5P2 1943 aa5.64□□□□□ -1.51
SMC2-205ENST00000493955 CC2D2AQ9P2K1 1620 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 SYCE3A1L190 88 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 PRAC2D3DTV9 90 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 NPIPA3F8WFD2 350 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 H0YIG0 161 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 INO80B-WBP1J3KQ70 363 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 CAPN9O14815 690 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 BAG3O95817 575 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 IGHV4-31P0DP07 118 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 IL1RL1Q01638 556 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 NADSYN1Q6IA69 706 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 ZNF770Q6IQ21 691 aaPredicted RBP5.63□□□□□ -1.51
SMC2-205ENST00000493955 TTC27Q6P3X3 843 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 CTR9Q6PD62 1173 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 SERPINA12Q8IW75 414 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 NAGSQ8N159 534 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 METTL27Q8N6F8 245 aaPredicted RBP5.63□□□□□ -1.51
SMC2-205ENST00000493955 KLHDC1Q8N7A1 406 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 LMNTD1Q8N9Z9 388 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 TSSK2Q96PF2 358 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 NDNQ99608 321 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 IDI2Q9BXS1 227 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 MTMR12Q9C0I1 747 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 ABCG8Q9H221 673 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 C6orf106Q9H6K1 298 aaPredicted RBP5.63□□□□□ -1.51
SMC2-205ENST00000493955 UPF2Q9HAU5 1272 aaKnown RBP5.63□□□□□ -1.51
SMC2-205ENST00000493955 ECHDC1Q9NTX5 307 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 HMG20BQ9P0W2 317 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 FAF1Q9UNN5 650 aaPredicted RBP5.63□□□□□ -1.51
SMC2-205ENST00000493955 TEX264Q9Y6I9 313 aa5.63□□□□□ -1.51
SMC2-205ENST00000493955 TRAV18A0A075B6X5 111 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 PRKNO60260 465 aaPredicted RBP5.62□□□□□ -1.51
SMC2-205ENST00000493955 DLATP10515 647 aaKnown RBP5.62□□□□□ -1.51
SMC2-205ENST00000493955 GP1BBP13224 206 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 DGKAP23743 735 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 TTC31Q49AM3 519 aaPredicted RBP5.62□□□□□ -1.51
SMC2-205ENST00000493955 PM20D1Q6GTS8 502 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 KLHL10Q6JEL2 608 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.62□□□□□ -1.514e-8■■■■□ 26.4
SMC2-205ENST00000493955 TOM1L2Q6ZVM7 507 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 ZNF410Q86VK4 478 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 EPSTI1Q96J88 318 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 RUFY1Q96T51 708 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 C1QTNF4Q9BXJ3 329 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 OR2B2Q9GZK3 357 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 TFB2MQ9H5Q4 396 aaKnown RBP5.62□□□□□ -1.51
SMC2-205ENST00000493955 TDRKHQ9Y2W6 561 aaKnown RBP5.62□□□□□ -1.51
SMC2-205ENST00000493955 RIPK3Q9Y572 518 aa5.62□□□□□ -1.51
SMC2-205ENST00000493955 PFASO15067 1338 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 IL16Q14005 1332 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 MYO15BQ96JP2 1530 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 KRT87PA6NCN2 255 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 SLC9B1P1A6NJY1 282 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 C2CD4DB7Z1M9 353 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 C16orf97H3BN30 126 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 CCL24O00175 119 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 SMAD6O43541 496 aaKnown RBP5.61□□□□□ -1.51
SMC2-205ENST00000493955 ABHD2P08910 425 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 PCP11498 1178 aaKnown RBP5.61□□□□□ -1.51
SMC2-205ENST00000493955 NR1D1P20393 614 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 MAPK3P27361 379 aaPredicted RBP5.61□□□□□ -1.51
SMC2-205ENST00000493955 SFTPDP35247 375 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 GAS1P54826 345 aa5.61□□□□□ -1.51
SMC2-205ENST00000493955 CASP9P55211 416 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms