RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PRKD1Q15139 912 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 RPS26P11Q5JNZ5 115 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 C11orf63Q6NUN7 778 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 KIAA1211LQ6NV74 962 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 BHLHB9Q6PI77 547 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 XKRXQ6PP77 449 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 POLNQ7Z5Q5 900 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 TTC29Q8NA56 475 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 HDAC10Q969S8 669 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 MTFMTQ96DP5 389 aaKnown RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 ALG14Q96F25 216 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 FOPNLQ96NB1 174 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 PSMB7Q99436 277 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 AGAP2Q99490 1192 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 NEU1Q99519 415 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 PRRX2Q99811 253 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 RBM4BQ9BQ04 359 aaKnown RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 TRAF4Q9BUZ4 470 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 RBM4Q9BWF3 364 aaKnown RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 TPSD1Q9BZJ3 242 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 MTG2Q9H4K7 406 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 UNKLQ9H9P5 680 aaKnown RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 ING3Q9NXR8 418 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 GPN3Q9UHW5 284 aaPredicted RBP11.26□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF221Q9UK13 617 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 RAB23Q9ULC3 237 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 RAB26Q9ULW5 256 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 PCDHB10Q9UN67 800 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 SLC22A14Q9Y267 594 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 MFHAS1Q9Y4C4 1052 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 PCDHB9Q9Y5E1 797 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 HRH3Q9Y5N1 445 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 WDR87Q6ZQQ6 2873 aa11.26□□□□□ -0.61
BRCA1-222ENST00000493919 CACNA1HO95180 2353 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 BTNL10A8MVZ5 291 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 LOC110117498-PIK3R3F6TDL0 507 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 H7C0S8 307 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 K7ESF4 209 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 CLDN4O14493 209 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 BNIP3LO60238 219 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 RHOBTB1O94844 696 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 LDOC1O95751 146 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 CRYABP02511 175 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 HOXD4P09016 255 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MLNP12872 115 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 AMPD1P23109 780 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 LEPRP48357 1165 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SERPINH1P50454 418 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 DGKEP52429 567 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 TEKQ02763 1124 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 DMWDQ09019 674 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 DPYSL3Q14195 570 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 TRMT5Q32P41 509 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 FAM98BQ52LJ0 330 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 KLHL12Q53G59 568 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SLC25A24Q6NUK1 477 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ARMC6Q6NXE6 501 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF783Q6ZMS7 281 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 KBTBD6Q86V97 674 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 RHOT1Q8IXI2 618 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SLC43A2Q8N370 569 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MCUQ8NE86 351 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 OR52H1Q8NGJ2 320 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 CASKIN2Q8WXE0 1202 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SNX19Q92543 992 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 TCEAL3Q969E4 200 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 HMCESQ96FZ2 354 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MRGPRX3Q96LB0 322 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ADAD1Q96M93 576 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ZNF347Q96SE7 839 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 GABRG3Q99928 467 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PELOQ9BRX2 385 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PAPOLGQ9BWT3 736 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SLCO3A1Q9UIG8 710 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 FBXO4Q9UKT5 387 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 GUCA1BQ9UMX6 200 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 AP4S1Q9Y587 144 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PCDHGA1Q9Y5H4 931 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 OR51B4Q9Y5P0 310 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 ACTL7AQ9Y615 435 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 A0A1W2PQF6 199 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 KRT87PA6NCN2 255 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 CENPXA8MT69 81 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 DFFAO00273 331 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 TFECO14948 347 aaPredicted RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 AGTP01019 485 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SRPRAP08240 638 aaKnown RBP11.25□□□□□ -0.61
BRCA1-222ENST00000493919 SP9P0CG40 484 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 CRHR1P34998 444 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PCGF2P35227 344 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 KIR3DL2P43630 455 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 MARCKSL1P49006 195 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PLK1P53350 603 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 TCF15Q12870 199 aa11.25□□□□□ -0.61
BRCA1-222ENST00000493919 PON3Q15166 354 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms