RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PIK3R3Q92569 461 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 OTUB1Q96FW1 271 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 PRICKLE1Q96MT3 831 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 DGCR6LQ9BY27 220 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 ACTL8Q9H568 366 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 MTHFD2LQ9H903 347 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 TXNDC16Q9P2K2 825 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-216ENST00000493758 CSAG2Q9Y5P2 127 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 CSNK1G3Q9Y6M4 447 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 R4GN57 208 aa3.57□□□□□ -1.84
ITGB1-216ENST00000493758 P4HA2O15460 535 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 TADA2AO75478 443 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 IGHEP01854 428 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 CD59P13987 128 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 PRKACGP22612 351 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 DSCR10P59022 87 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 SGCGQ13326 291 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 MTHFSDQ2M296 383 aaKnown RBP3.56□□□□□ -1.84
ITGB1-216ENST00000493758 KRT39Q6A163 491 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 CCDC60Q8IWA6 550 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-216ENST00000493758 KLHDC1Q8N7A1 406 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 AMER3Q8N944 861 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 NUP37Q8NFH4 326 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 OR7A2PQ8NGA2 310 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 SEPT1Q8WYJ6 367 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 PROX1Q92786 737 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 ZNF486Q96H40 463 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-216ENST00000493758 RMDN2Q96LZ7 410 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 CDCA3Q99618 268 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-216ENST00000493758 GPATCH1Q9BRR8 931 aaKnown RBP3.56□□□□□ -1.84
ITGB1-216ENST00000493758 LRRC61Q9BV99 259 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 SLC2A11Q9BYW1 496 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 WDR35Q9P2L0 1181 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 SWAP70Q9UH65 585 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 PRDM4Q9UKN5 801 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 CCL27Q9Y4X3 112 aa3.56□□□□□ -1.84
ITGB1-216ENST00000493758 IL16Q14005 1332 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 HMGB1P1B2RPK0 211 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 FPGTO14772 594 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 IDH3BO43837 385 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 RECQL5O94762 991 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 EEF1DP29692 281 aaKnown RBP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 ILF2Q12905 390 aaKnown RBP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 TRA2AQ13595 282 aaKnown RBP eCLIP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 CDH18Q13634 790 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 RASA2Q15283 850 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 E2F5Q15329 346 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 PTGISQ16647 500 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 KRT71Q3SY84 523 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 SUSD4Q5VX71 490 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 SPINK14Q6IE38 97 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 RPUSD3Q6P087 351 aaKnown RBP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 PAQR6Q6TCH4 344 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 RCOR2Q8IZ40 523 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 LRRC15Q8TF66 581 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 CHURC1Q8WUH1 139 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 CENPTQ96BT3 561 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 SPATA33Q96N06 139 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 NECTIN4Q96NY8 510 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 CCDC3Q9BQI4 270 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 TRIM6Q9C030 488 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-216ENST00000493758 NYXQ9GZU5 481 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 RABEP2Q9H5N1 569 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 PANK3Q9H999 370 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 SPHK2Q9NRA0 654 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 PANK4Q9NVE7 773 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 TBC1D7Q9P0N9 293 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 C5AR2Q9P296 337 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 SELENOKQ9Y6D0 94 aa3.55□□□□□ -1.84
ITGB1-216ENST00000493758 PCNX3Q9H6A9 2034 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 TBX10O75333 385 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 RPS6KA5O75582 802 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 OR52Z1P0C646 297 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 RBMS1P29558 406 aaKnown RBP3.54□□□□□ -1.84
ITGB1-216ENST00000493758 PPP5CP53041 499 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 RAD23AP54725 363 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 XGP55808 180 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 UBASH3AP57075 661 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 MTF1Q14872 753 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 OPCMLQ14982 345 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 PTPN14Q15678 1187 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 HYAL4Q2M3T9 481 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 CHST3Q7LGC8 479 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 ERC1Q8IUD2 1116 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 MFN1Q8IWA4 741 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 GPC2Q8N158 579 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 Q8N377 158 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 KCNE4Q8WWG9 221 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 EXT2Q93063 718 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 P2RX5Q93086 422 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 FAM218AQ96MZ4 157 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 FOXN4Q96NZ1 517 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 SERINC2Q96SA4 455 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 LGMNQ99538 433 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 SDCBP2Q9H190 292 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 FZD8Q9H461 694 aa3.54□□□□□ -1.84
ITGB1-216ENST00000493758 BCCIPQ9P287 314 aaKnown RBP eCLIP3.54□□□□□ -1.84
ITGB1-216ENST00000493758 IL36AQ9UHA7 158 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms