RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CALHM3Q86XJ0 350 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CFAP206Q8IYR0 622 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 CHPFQ8IZ52 775 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 NELL1Q92832 810 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 PAK1IP1Q9NWT1 392 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-220ENST00000492280 RAPGEFL1Q9UHV5 662 aa12.04□□□□□ -0.48
HMGN1-220ENST00000492280 FAM220BPB1ANY3 271 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 SPINT1O43278 529 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 GSTM1P09488 218 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 FMO3P31513 532 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 GSTM4Q03013 218 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 BNIP3Q12983 259 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 RAPSNQ13702 412 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 LDLRAP1Q5SW96 308 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 PLEKHS1Q5SXH7 462 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 LAIR1Q6GTX8 287 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 METTL3Q86U44 580 aaKnown RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 CYP4Z1Q86W10 505 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 C8orf59Q8N0T1 100 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 OR5AK3PQ8NH89 298 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 HUS1BQ8NHY5 278 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 GLYATL1Q969I3 302 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 UBE2FQ969M7 185 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 LHPPQ9H008 270 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 CERS4Q9HA82 394 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 AASDHPPTQ9NRN7 309 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 SAGE1Q9NXZ1 904 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 SH3BP4Q9P0V3 963 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 TMEFF2Q9UIK5 374 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 SCN2BO60939 215 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 ERN1O75460 977 aaKnown RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 SCELO95171 688 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 FKBP9O95302 570 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 CYP17A1P05093 508 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 PTPN2P17706 415 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 MMP12P39900 470 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 TBPL1P62380 186 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 RAE1P78406 368 aaKnown RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 DHCR24Q15392 516 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 SMN1Q16637 294 aaKnown RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 ZNF385BQ569K4 471 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 TMC5Q6UXY8 1006 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 Q6ZPB1 254 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 FKBP9P1Q75LS8 142 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 THAP5Q7Z6K1 395 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 PTOV1Q86YD1 416 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 MRPL43Q8N983 215 aaKnown RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 CHDHQ8NE62 594 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-220ENST00000492280 DDHD1Q8NEL9 900 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 CEP44Q9C0F1 390 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 OR51B5Q9H339 312 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 C11orf49Q9H6J7 331 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 RMND5AQ9H871 391 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 PRDM8Q9NQV8 689 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 LAMA1P25391 3075 aa12.03□□□□□ -0.48
HMGN1-220ENST00000492280 MMP20O60882 483 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 TGFB1P01137 390 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 PRPS2P11908 318 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 FUT4P22083 530 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 ALDH4A1P30038 563 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 DGKGP49619 791 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 HNMTP50135 292 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 HLCSP50747 726 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 IL5RAQ01344 420 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 CAMK1Q14012 370 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 GGTA1PQ4G0N0 100 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 XAF1Q6GPH4 301 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 RAET1GQ6H3X3 334 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 ERI1Q8IV48 349 aaKnown RBP12.02□□□□□ -0.48
HMGN1-220ENST00000492280 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.48
HMGN1-220ENST00000492280 EID3Q8N140 333 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 OR7G3Q8NG95 312 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 PYURFQ96I23 114 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 HSH2DQ96JZ2 352 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 ASIC5Q9NY37 505 aa12.02□□□□□ -0.48
HMGN1-220ENST00000492280 GABRR3A8MPY1 467 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 SLCO2B1O94956 709 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 SOD1P00441 154 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ANXA4P09525 319 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 MPC1LP0DKB6 136 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 CRHBPP24387 322 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 NNMTP40261 264 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 EMP3P54852 163 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 NFE2L1Q14494 772 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ATG9BQ674R7 924 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 PRR23BQ6ZRT6 265 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 TRMT11Q7Z4G4 463 aaKnown RBP12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ZZZ3Q8IYH5 903 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.49
HMGN1-220ENST00000492280 ZNF480Q8WV37 535 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms