RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 AP3B1O00203 1094 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 VAPBO95292 243 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 CDH2P19022 906 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 PRAMEP78395 509 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 CDKL1Q00532 357 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 GK3PQ14409 553 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 AGAP9Q5VTM2 703 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 WASH2PQ6VEQ5 465 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 TRIML2Q8N7C3 387 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 TMEM102Q8N9M5 508 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 PEX13Q92968 403 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF514Q96K75 400 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 SCYL1Q96KG9 808 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 DEPDC7Q96QD5 511 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 GPR22Q99680 433 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 NUDT22Q9BRQ3 303 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 OSBPL11Q9BXB4 747 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 MRM3Q9HC36 420 aaKnown RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 WASH6PQ9NQA3 447 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 UTP6Q9NYH9 597 aaKnown RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 SUCOQ9UBS9 1254 aaKnown RBP9.11□□□□□ -0.95
BRCA1-219ENST00000491747 ZDHHC2Q9UIJ5 367 aa9.11□□□□□ -0.95
BRCA1-219ENST00000491747 KIR2DS5A0A0G2JLQ3 304 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 A0A0G2JNG1 304 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 OR5K4A6NMS3 321 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 KIR2DS3K7RE56 304 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 AGRPO00253 132 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TAF4O00268 1085 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 KCNJ13O60928 360 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 COL6A2P12110 1019 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CD1EP15812 388 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF23P17027 643 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF26P17031 533 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CSF2RBP32927 897 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 GPR3P46089 330 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ARCN1P48444 511 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CYP4F3Q08477 520 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 USP10Q14694 798 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 KIR2DS5Q14953 304 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TMEM198Q66K66 360 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 SLC9B2Q86UD5 537 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CFAP206Q8IYR0 622 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TSPAN14Q8NG11 270 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 GPR150Q8NGU9 434 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CEP70Q8NHQ1 597 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 HEXDCQ8WVB3 486 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 INSM2Q96T92 566 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CCT7Q99832 543 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 MCMBPQ9BTE3 642 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 SEMA6CQ9H3T2 930 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 RHOJQ9H4E5 214 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 IARS2Q9NSE4 1012 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ADA2Q9NZK5 511 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TMEM9Q9P0T7 183 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 RSL24D1Q9UHA3 163 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 AP4S1Q9Y587 144 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 COPG1Q9Y678 874 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CFAP20Q9Y6A4 193 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CFAP99D6REC4 459 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CD3EAPO15446 510 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 H6PDO95479 791 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 PROS1P07225 676 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 F7P08709 466 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TCN1P20061 433 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 PDHA2P29803 388 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 SLC5A2P31639 672 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ABCG1P45844 678 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TXNL4AP83876 142 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ZFP36L1Q07352 338 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 STX5Q13190 355 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TRIM25Q14258 630 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 MAPRE2Q15555 327 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 RPE65Q16518 533 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 KRT80Q6KB66 452 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 DUS1LQ6P1R4 473 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 AMIGO2Q86SJ2 522 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ERI1Q8IV48 349 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 SLITRK4Q8IW52 837 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CHERPQ8IWX8 916 aaKnown RBP9.1□□□□□ -0.95
BRCA1-219ENST00000491747 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 WDR48Q8TAF3 677 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 ZNF597Q96LX8 424 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 SLC38A3Q99624 504 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CCM2Q9BSQ5 444 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 EFHD1Q9BUP0 239 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CATSPERZQ9NTU4 200 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 CEPT1Q9Y6K0 416 aa9.1□□□□□ -0.95
BRCA1-219ENST00000491747 STX16-NPEPL1H3BU86 382 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 C8BP07358 591 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 SLC2A4P14672 509 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 SAT1P21673 171 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 PCSK6P29122 969 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 NSG1P42857 185 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 GLRBP48167 497 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 CSRP3P50461 194 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 ADARP55265 1226 aaKnown RBP9.09□□□□□ -0.95
BRCA1-219ENST00000491747 RHDQ02161 417 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 RTP5Q14D33 572 aa9.09□□□□□ -0.95
BRCA1-219ENST00000491747 NRF1Q16656 503 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms