RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ELK3P41970 407 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 GNG11P61952 73 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 SNRPNP63162 240 aaKnown RBP17.14■□□□□ 0.33
HMGN1-219ENST00000491183 KLC1Q07866 573 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 MORF4L2Q15014 288 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 PRAMEF13Q5VWM6 474 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 UGT3A1Q6NUS8 523 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 PRSS58Q8IYP2 241 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 MIEF2Q96C03 454 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 PRAP1Q96NZ9 151 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 TAS2R13Q9NYV9 303 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 ZNF282Q9UDV7 671 aaPredicted RBP17.14■□□□□ 0.33
HMGN1-219ENST00000491183 VPS4AQ9UN37 437 aa17.14■□□□□ 0.33
HMGN1-219ENST00000491183 HECTD1Q9ULT8 2610 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 FFAR3O14843 346 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 HAT1O14929 419 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 TP73O15350 636 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 GPR42O15529 346 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 P2RX6O15547 441 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 FOXS1O43638 330 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 FBLP22087 321 aaKnown RBP17.13■□□□□ 0.33
HMGN1-219ENST00000491183 ITGA3P26006 1051 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 PGGT1BP53609 377 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 OCA2Q04671 838 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 RBBP7Q16576 425 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 THEMIS2Q5TEJ8 643 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 HIBCHQ6NVY1 386 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-219ENST00000491183 TRMT10BQ6PF06 316 aaKnown RBP17.13■□□□□ 0.33
HMGN1-219ENST00000491183 KIAA0408Q6ZU52 694 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 SYDE1Q6ZW31 735 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-219ENST00000491183 ADCK2Q7Z695 626 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 PARP9Q8IXQ6 854 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 AMER3Q8N944 861 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 OR11G2Q8NGC1 345 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 MCOLN3Q8TDD5 553 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 CCDC138Q96M89 665 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 TRIM51Q9BSJ1 452 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 CRB3Q9BUF7 120 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 UTP6Q9NYH9 597 aaKnown RBP17.13■□□□□ 0.33
HMGN1-219ENST00000491183 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 CDC14AQ9UNH5 594 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 CHMP2BQ9UQN3 213 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 SAR1BQ9Y6B6 198 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 TEX264Q9Y6I9 313 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 COL12A1Q99715 3063 aa17.13■□□□□ 0.33
HMGN1-219ENST00000491183 FANCGO15287 622 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 KLHL41O60662 606 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 IPO13O94829 963 aaKnown RBP17.12■□□□□ 0.33
HMGN1-219ENST00000491183 ALPPP05187 535 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 C8GP07360 202 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 SLC26A3P40879 764 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 RGS4P49798 205 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 DR1Q01658 176 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 Q0VFX4 171 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 ZXDCQ2QGD7 858 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-219ENST00000491183 TUBB8Q3ZCM7 444 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 GARNL3Q5VVW2 1013 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 ATG9BQ674R7 924 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 MBOAT1Q6ZNC8 495 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 GALNT7Q86SF2 657 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 FAM26EQ8N5C1 309 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 GABPB2Q8TAK5 448 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-219ENST00000491183 RERGQ96A58 199 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-219ENST00000491183 C19orf60Q96EN9 201 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 MVB12AQ96EY5 273 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 LINGO1Q96FE5 620 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 CFAP36Q96G28 342 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 PARVBQ9HBI1 364 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 CCDC177Q9NQR7 707 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-219ENST00000491183 TMEM184CQ9NVA4 438 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 SH2B3Q9UQQ2 575 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 B3GNT3Q9Y2A9 372 aa17.12■□□□□ 0.33
HMGN1-219ENST00000491183 MRPS2Q9Y399 296 aaKnown RBP17.12■□□□□ 0.33
HMGN1-219ENST00000491183 SLC16A5O15375 505 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 TTI1O43156 1089 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 TSPAN12O95859 305 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 STATHP02808 62 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 ITGA8P53708 1063 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 TBPL1P62380 186 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 DSG2Q14126 1118 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 PHKG1Q16816 387 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 CRB2Q5IJ48 1285 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 STEAP4Q687X5 459 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 AGTRAPQ6RW13 159 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 Q6ZS92 163 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 VN1R4Q7Z5H5 301 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 C8orf44Q96CB5 159 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 SNRNP40Q96DI7 357 aaKnown RBP17.11■□□□□ 0.33
HMGN1-219ENST00000491183 MMABQ96EY8 250 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-219ENST00000491183 RUNDC3BQ96NL0 473 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 NAPGQ99747 312 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-219ENST00000491183 ATG10Q9H0Y0 220 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 PPANQ9NQ55 473 aaKnown RBP17.11■□□□□ 0.33
HMGN1-219ENST00000491183 TRPC4Q9UBN4 977 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 C3orf18Q9UK00 162 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 CSAG2Q9Y5P2 127 aa17.11■□□□□ 0.33
HMGN1-219ENST00000491183 A0A0A6YYC8 382 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms