RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ADAMTS16Q8TE57 1224 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 CYGBQ8WWM9 190 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 GFM2Q969S9 779 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 MIR1-1HGQ9H1L0 117 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 LIN28AQ9H9Z2 209 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 FGF22Q9HCT0 170 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 PHPT1Q9NRX4 125 aaPredicted RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 CIDEBQ9UHD4 219 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 ANAPC2Q9UJX6 822 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 DYTNA2CJ06 578 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 GIPC1O14908 333 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 ITPKAP23677 461 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 POLR2JP52435 117 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 UFM1P61960 85 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 ZBED5Q49AG3 693 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 PDCD4Q53EL6 469 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 PMS2CLQ68D20 193 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 PTRHD1Q6GMV3 140 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 TMEM220Q6QAJ8 160 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 TBC1D21Q8IYX1 336 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 SIDT2Q8NBJ9 832 aaKnown RBP22.04■■□□□ 1.12
USF3-203ENST00000491165 HGH1Q9BTY7 390 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 TM7SF3Q9NS93 570 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 GNPTGQ9UJJ9 305 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 PCDHB1Q9Y5F3 818 aa22.04■■□□□ 1.12
USF3-203ENST00000491165 TRIM64A6NGJ6 449 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 EI24O14681 340 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 SCAMP1O15126 338 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 VPS26AO75436 327 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 TRIM16O95361 564 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 NCK1P16333 377 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 CLCN7P51798 805 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 ERVK-8P63133 956 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 CROCCQ5TZA2 2017 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 C11orf96Q7Z7L8 435 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 ZBTB44Q8NCP5 570 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 PAPD5Q8NDF8 572 aaKnown RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 OR56A4Q8NGH8 313 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 SARS2Q9NP81 518 aaKnown RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 RIC8BQ9NVN3 520 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 ZNF225Q9UK10 706 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 FANCMQ8IYD8 2048 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 ZFC3H1O60293 1989 aaKnown RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 PRR33A8MZF0 331 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 CLOCKO15516 846 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 SEC24DO94855 1032 aaPredicted RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 CASP2P42575 452 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 PLK5Q496M5 336 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 CRTC3Q6UUV7 619 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 XKR5Q6UX68 686 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 CLVS1Q8IUQ0 354 aaPredicted RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 KIAA2013Q8IYS2 634 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 LILRA3Q8N6C8 439 aaPredicted RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 CD200R1Q8TD46 325 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 DNASE2BQ8WZ79 361 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 KCNJ9Q92806 393 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 PDXPQ96GD0 296 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 AASDHPPTQ9NRN7 309 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 GPR27Q9NS67 375 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 TMEM74BQ9NUR3 256 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 SMPD3Q9NY59 655 aaPredicted RBP22.03■■□□□ 1.12
USF3-203ENST00000491165 ZIM2Q9NZV7 527 aa22.03■■□□□ 1.12
USF3-203ENST00000491165 TDRD6O60522 2096 aaKnown RBP22.02■■□□□ 1.12
USF3-203ENST00000491165 CFAP99D6REC4 459 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 ZNF701M0R085 212 aaPredicted RBP22.02■■□□□ 1.12
USF3-203ENST00000491165 NUAK1O60285 661 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 CCR7P32248 378 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 PRLHRP49683 370 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 TIGD2Q4W5G0 525 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 UGT3A1Q6NUS8 523 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 SCIMPQ6UWF3 145 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 GPRIN3Q6ZVF9 776 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 TRAPPC5Q8IUR0 188 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 ISOC1Q96CN7 298 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 FBXL20Q96IG2 436 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 C1orf50Q9BV19 199 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 FAM8A1Q9UBU6 413 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 TRMT6Q9UJA5 497 aaKnown RBP22.02■■□□□ 1.12
USF3-203ENST00000491165 SLC17A4Q9Y2C5 497 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 ST14Q9Y5Y6 855 aa22.02■■□□□ 1.12
USF3-203ENST00000491165 FAM234BA2RU67 622 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 CACNB4O00305 520 aaPredicted RBP22.01■■□□□ 1.11
USF3-203ENST00000491165 CAPGP40121 348 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 PI4KAP42356 2102 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 RANBP1P43487 201 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 EMP3P54852 163 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 NFATC4Q14934 902 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 PLA2G4EQ3MJ16 856 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 ABRAXAS1Q6UWZ7 409 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 RGL4Q8IZJ4 473 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 DHRSXQ8N5I4 330 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 OR2T11Q8NH01 316 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 TMEM74Q96NL1 305 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 TM9SF3Q9HD45 589 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 TMEM45AQ9NWC5 275 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 GALNT8Q9NY28 637 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 A0A1W2PR77 199 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 E5RI56 91 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 VEGFDO43915 354 aa22.01■■□□□ 1.11
USF3-203ENST00000491165 LDLRP01130 860 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms