RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 OR2A25A4D2G3 310 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 D6RAR5 112 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 H7BY64 318 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 PPP6CO00743 305 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 SLC30A4O14863 429 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 HGSO14964 777 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-230ENST00000491028 PRAMEF4O60810 478 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 LYPLA1O75608 230 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-230ENST00000491028 OR4F21O95013 312 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 JUPP14923 745 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 GRK3P35626 688 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 LSSP48449 732 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ERVPABLB-1P60509 514 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 CSNK1G2P78368 415 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 REEP5Q00765 189 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 RELAQ04206 551 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 TUBB8Q3ZCM7 444 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 PRAMEF9Q5VWM5 478 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 LETMD1Q6P1Q0 360 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 FIGLAQ6QHK4 219 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ADCK2Q7Z695 626 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 PAQR7Q86WK9 346 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 KMT5CQ86Y97 462 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 FAM20CQ8IXL6 584 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 KRT78Q8N1N4 520 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 TBC1D19Q8N5T2 526 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 C19orf47Q8N9M1 422 aaKnown RBP17.9■□□□□ 0.46
MCF2L-230ENST00000491028 DEFB124Q8NES8 71 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 UBE2E3Q969T4 207 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 PRAP1Q96NZ9 151 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 TRAPPC9Q96Q05 1148 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 SLC29A3Q9BZD2 475 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ILKAPQ9H0C8 392 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ZNF225Q9UK10 706 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ATXN7L1Q9ULK2 861 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-230ENST00000491028 ZFHX2Q9C0A1 2572 aaPredicted RBP17.9■□□□□ 0.46
MCF2L-230ENST00000491028 WDR87Q6ZQQ6 2873 aa17.9■□□□□ 0.46
MCF2L-230ENST00000491028 COL27A1Q8IZC6 1860 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 KCNE1BA0A087WTH5 132 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 A0A1B0GTL3 188 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 TM4SF5O14894 197 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 RASSF9O75901 435 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 FGF4P08620 206 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 ANKRD34CP0C6C1 535 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 HGFP14210 728 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 ST6GAL1P15907 406 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 CD22P20273 847 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 VARSP26640 1264 aaKnown RBP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 GYS2P54840 703 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 SLBPQ14493 270 aaKnown RBP eCLIP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 HIST2H2ACQ16777 129 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 CACHD1Q5VU97 1274 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 HIST2H2AA3Q6FI13 130 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 ATG14Q6ZNE5 492 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 MYLK4Q86YV6 388 aaPredicted RBP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 DCBLD1Q8N8Z6 715 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 PPM1MQ96MI6 270 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 CDK15Q96Q40 435 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 SARGQ9BW04 601 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 C20orf27Q9GZN8 174 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 CHRNA10Q9GZZ6 450 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF768Q9H5H4 540 aaKnown RBP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 NT5DC2Q9H857 520 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 GEMIN8Q9NWZ8 242 aaKnown RBP17.89■□□□□ 0.45
MCF2L-230ENST00000491028 TOR4AQ9NXH8 423 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 TMEM9Q9P0T7 183 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 RNF11Q9Y3C5 154 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 HEATR5BQ9P2D3 2071 aa17.89■□□□□ 0.45
MCF2L-230ENST00000491028 TRBC2A0A5B9 178 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 TCP11X1B4DZS4 312 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 H0YIV9 168 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 AZIN1O14977 448 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 KIF1CO43896 1103 aaKnown RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 CRCPO75575 148 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 ZBTB11O95625 1053 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 THRAP10827 490 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 HOXB3P14651 431 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 PVRP15151 417 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 EZRP15311 586 aaKnown RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 MPSTP25325 297 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 GSTM2P28161 218 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 TRA2AQ13595 282 aaKnown RBP eCLIP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 SH2D4BQ5SQS7 431 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 C10orf62Q5T681 223 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 FCRL6Q6DN72 434 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 MED27Q6P2C8 311 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF574Q6ZN55 896 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 CRLF3Q8IUI8 442 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 AFAP1L2Q8N4X5 818 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF781Q8N8C0 355 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 REPS1Q96D71 796 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 TCTN2Q96GX1 697 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 SHCBP1LQ9BZQ2 653 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 ZNF395Q9H8N7 513 aaPredicted RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 KLHL3Q9UH77 587 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 CDV3Q9UKY7 258 aaKnown RBP17.88■□□□□ 0.45
MCF2L-230ENST00000491028 BTRCQ9Y297 605 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 PCDHGA11Q9Y5H2 935 aa17.88■□□□□ 0.45
MCF2L-230ENST00000491028 UNC13CQ8NB66 2214 aa17.87■□□□□ 0.45
MCF2L-230ENST00000491028 IGHV5-51A0A0C4DH38 117 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms