RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 ALDH18A1P54886 795 aaKnown RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 CDH13P55290 713 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 HERVK_113P63132 956 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 CDKL1Q00532 357 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 RPA4Q13156 261 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 SP140Q13342 867 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 C1orf61Q13536 156 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PTK2BQ14289 1009 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 SHBQ15464 509 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 KIF19Q2TAC6 998 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 UAP1L1Q3KQV9 507 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ZNF528Q3MIS6 628 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ZNF678Q5SXM1 525 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PRAMEF9Q5VWM5 478 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 LYSMD4Q5XG99 296 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 SLC30A9Q6PML9 568 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ABRAXAS1Q6UWZ7 409 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 RNF111Q6ZNA4 994 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 FAM47EQ6ZV65 393 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 LPCAT2Q7L5N7 544 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 TAX1BP1Q86VP1 789 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PARGQ86W56 976 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 LRRC56Q8IYG6 542 aaPredicted RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 FBXO39Q8N4B4 442 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ANKS4BQ8N8V4 417 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 OR5AR1Q8NGP9 310 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 CFAP61Q8NHU2 1237 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 LRRC8CQ8TDW0 803 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ZNF483Q8TF39 744 aaPredicted RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 UBTD2Q8WUN7 234 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 SKA2Q8WVK7 121 aaPredicted RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 DYDC1Q8WWB3 177 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PATE1Q8WXA2 126 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 TFGQ92734 400 aaPredicted RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 TSNARE1Q96NA8 513 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PKP4Q99569 1192 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 LRRC61Q9BV99 259 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 C1QTNF3Q9BXJ4 246 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ERVK-6Q9BXR3 956 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 DRC3Q9H069 523 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 OSGEPL1Q9H4B0 414 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 RABEP2Q9H5N1 569 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 FSCN3Q9NQT6 498 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 FGFR1OP2Q9NVK5 253 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 TRNAU1APQ9NX07 287 aaKnown RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ZSCAN32Q9NX65 697 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 NUDT4Q9NZJ9 180 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ZNF624Q9P2J8 865 aaPredicted RBP4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ZNF225Q9UK10 706 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PILRBQ9UKJ0 227 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 PCTPQ9UKL6 214 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 TCFL5Q9UL49 500 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ACSL5Q9ULC5 683 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 MUC6Q6W4X9 2439 aa4.71□□□□□ -1.66
EPCAM-206ENST00000490733 ASCC3Q8N3C0 2202 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 UNC13CQ8NB66 2214 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 A0A1B0GTW7 788 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 A0A1W2PPV9 198 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 KLHL33A6NCF5 533 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SRRM3A6NNA2 597 aaPredicted RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SYCE1LA8MT33 242 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 NOTOA8MTQ0 251 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 PATE3B3GLJ2 98 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 TMEM114B3SHH9 223 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 TMEM233B4DJY2 109 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 STX16-NPEPL1H3BU86 382 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 OR7A17O14581 309 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 ZNF195O14628 629 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 STX16O14662 325 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 NPHS1O60500 1241 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SNX2O60749 519 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 KCNJ13O60928 360 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SMIM24O75264 130 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SLC16A8O95907 504 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 TNFP01375 233 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 JUNP05412 331 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SYPP08247 313 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SLC35G4P0C7Q5 338 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 C1QTNF9P0C862 333 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 GIMD1P0DJR0 217 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 ERGP11308 486 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 MTHFD1P11586 935 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 GFAPP14136 432 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 CYP2A7P20853 494 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 IDSP22304 550 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 PRDX3P30048 256 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 ACTR1BP42025 376 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 SLC1A6P48664 564 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 AFF3P51826 1226 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 FOXA1P55317 472 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 AP1S2P56377 157 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 PCBP3P57721 371 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 ACTR1AP61163 376 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 ABCE1P61221 599 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 YBX1P67809 324 aaKnown RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 PLOD1Q02809 727 aaPredicted RBP4.7□□□□□ -1.66
EPCAM-206ENST00000490733 CHRNEQ04844 493 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 OVGP1Q12889 678 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 PRKG2Q13237 762 aa4.7□□□□□ -1.66
EPCAM-206ENST00000490733 STX3Q13277 289 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms