RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CDC23Q9UJX2 597 aa17.02■□□□□ 0.32
ABCF3-217ENST00000489719 SPTA1P02549 2419 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 BOD1L1Q8NFC6 3051 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 GCN1Q92616 2671 aaKnown RBP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 PRPF4O43172 522 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 KLHL41O60662 606 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 CEACAM4O75871 244 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 PDGFAP04085 211 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 UMODP07911 640 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 MMP11P24347 488 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 FOXL2P58012 376 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 ILF2Q12905 390 aaKnown RBP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 GARNL3Q5VVW2 1013 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 PRAMEF13Q5VWM6 474 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 C17orf64Q86WR6 236 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 PDLIM5Q96HC4 596 aaKnown RBP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 OLFM1Q99784 485 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 CLMPQ9H6B4 373 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 SOX17Q9H6I2 414 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 SAYSD1Q9NPB0 183 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 ATP13A2Q9NQ11 1180 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 CUEDC1Q9NWM3 386 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 GPR83Q9NYM4 423 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 ZNF282Q9UDV7 671 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-217ENST00000489719 SEC16AO15027 2179 aa17.01■□□□□ 0.31
ABCF3-217ENST00000489719 TLN1Q9Y490 2541 aaKnown RBP17■□□□□ 0.31
ABCF3-217ENST00000489719 AGPSO00116 658 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 HAT1O14929 419 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 ZIC2O95409 532 aaPredicted RBP17■□□□□ 0.31
ABCF3-217ENST00000489719 ANXA5P08758 320 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 PGGT1BP53609 377 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 AP1S2P56377 157 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 TBPL1P62380 186 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 CAV1Q03135 178 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 NDUFA9Q16795 377 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 COLEC12Q5KU26 742 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 DUPD1Q68J44 220 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 CAPN13Q6MZZ7 669 aaPredicted RBP17■□□□□ 0.31
ABCF3-217ENST00000489719 MBOAT1Q6ZNC8 495 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 CAPN12Q6ZSI9 719 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 SHISA6Q6ZSJ9 500 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 COX15Q7KZN9 410 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 PPP1R32Q7Z5V6 425 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 ZC3HC1Q86WB0 502 aaKnown RBP17■□□□□ 0.31
ABCF3-217ENST00000489719 HPS6Q86YV9 775 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 PLD3Q8IV08 490 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 NKAPQ8N5F7 415 aaKnown RBP17■□□□□ 0.31
ABCF3-217ENST00000489719 ATL1Q8WXF7 558 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 CDKL2Q92772 493 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 MIEF2Q96C03 454 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 MVB12AQ96EY5 273 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 VPS39Q96JC1 886 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 HAUS8Q9BT25 410 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 RAB17Q9H0T7 212 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 TXNDC16Q9P2K2 825 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 RUVBL1Q9Y265 456 aaKnown RBP17■□□□□ 0.31
ABCF3-217ENST00000489719 PSAT1Q9Y617 370 aa17■□□□□ 0.31
ABCF3-217ENST00000489719 FAM95CA0A1B0GW59 222 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 VSTM2BA6NLU5 285 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 DPM1O60762 260 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 MED26O95402 600 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 TSPAN12O95859 305 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 FBLP22087 321 aaKnown RBP16.99■□□□□ 0.31
ABCF3-217ENST00000489719 GRK3P35626 688 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 PLTPP55058 493 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 RPS15AP62244 130 aaKnown RBP16.99■□□□□ 0.31
ABCF3-217ENST00000489719 RAPSNQ13702 412 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 PHKG1Q16816 387 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 HKDC1Q2TB90 917 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 C3orf62Q6ZUJ4 267 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 GALNT16Q8N428 558 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 DTWD1Q8N5C7 304 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 STT3BQ8TCJ2 826 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 THAP11Q96EK4 314 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 MMABQ96EY8 250 aaPredicted RBP16.99■□□□□ 0.31
ABCF3-217ENST00000489719 C10orf90Q96M02 699 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 SPSB2Q99619 263 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 NUDT9Q9BW91 350 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 SEMA3GQ9NS98 782 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 CTSFQ9UBX1 484 aa16.99■□□□□ 0.31
ABCF3-217ENST00000489719 HELZ2Q9BYK8 2649 aaKnown RBP16.99■□□□□ 0.31
ABCF3-217ENST00000489719 GUCA1CO95843 209 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 ALPPP05187 535 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 ENO2P09104 434 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-217ENST00000489719 ZGLP1P0C6A0 271 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 NPPBP16860 134 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 SSTR1P30872 391 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 CKAP4Q07065 602 aaKnown RBP16.98■□□□□ 0.31
ABCF3-217ENST00000489719 RBBP7Q16576 425 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 LCTLQ6UWM7 567 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 TMEM151BQ8IW70 566 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 PRSS58Q8IYP2 241 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 SMAD5Q99717 465 aaKnown RBP16.98■□□□□ 0.31
ABCF3-217ENST00000489719 CRB3Q9BUF7 120 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 SGPP1Q9BX95 441 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 RHOJQ9H4E5 214 aa16.98■□□□□ 0.31
ABCF3-217ENST00000489719 C5AR2Q9P296 337 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms