RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 TRPC4Q9UBN4 977 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 PCYOX1Q9UHG3 505 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 TRMT6Q9UJA5 497 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 C3orf18Q9UK00 162 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 ADAMTS6Q9UKP5 1117 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 CDC14AQ9UNH5 594 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 TCP11X1B4DZS4 312 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 HAT1O14929 419 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 KLHL41O60662 606 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 TTC4O95801 387 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 EZRP15311 586 aaKnown RBP11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 EMP3P54852 163 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 GNG11P61952 73 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 Q0VFX4 171 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 HIF1AQ16665 826 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 TUBB8Q3ZCM7 444 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 SPANXN3Q5MJ09 141 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 RBM20Q5T481 1227 aaKnown RBP11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 UGT3A1Q6NUS8 523 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 PAQR3Q6TCH7 311 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 MCOLN3Q8TDD5 553 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 TM9SF4Q92544 642 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 SLCO2A1Q92959 643 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 ALKBH8Q96BT7 664 aaKnown RBP11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 C8orf44Q96CB5 159 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 SNRNP40Q96DI7 357 aaKnown RBP11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 MMABQ96EY8 250 aaPredicted RBP11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 CFAP36Q96G28 342 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 ILKAPQ9H0C8 392 aaPredicted RBP11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 PLAC1Q9HBJ0 212 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 TAS2R13Q9NYV9 303 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 SLC17A6Q9P2U8 582 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 PDE10AQ9Y233 779 aa11.36□□□□□ -0.59
CCHCR1-215ENST00000488920 A0A0A6YYC8 382 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 BLACEA4D250 179 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 I3L1I5 382 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 EIF3FO00303 357 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 P2RX6O15547 441 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 FOXS1O43638 330 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ACPPP15309 386 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 SLC26A3P40879 764 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ELK3P41970 407 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 GLRBP48167 497 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 RGS4P49798 205 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 PGGT1BP53609 377 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 EMP2P54851 167 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 SNRPNP63162 240 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 DR1Q01658 176 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 RELAQ04206 551 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 MRPL49Q13405 166 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 DSG2Q14126 1118 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 SYT16Q17RD7 645 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 EIF2S3LQ2VIR3 472 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 TEDDM1Q5T9Z0 273 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 FHL5Q5TD97 284 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 AGAP7PQ5VUJ5 663 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 IRAK1BP1Q5VVH5 260 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 GARNL3Q5VVW2 1013 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ATG9BQ674R7 924 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 FAAH2Q6GMR7 532 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 MBOAT1Q6ZNC8 495 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 CUZD1Q86UP6 607 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 CREG2Q8IUH2 290 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 PALM2Q8IXS6 379 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 IQCKQ8N0W5 287 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ARHGEF39Q8N4T4 335 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 AMER3Q8N944 861 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 GABPB2Q8TAK5 448 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 LINGO1Q96FE5 620 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 THOC3Q96J01 351 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 VPS50Q96JG6 964 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 CCDC138Q96M89 665 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 AGAP4Q96P64 663 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 MACROD1Q9BQ69 325 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 NAT9Q9BTE0 207 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 LHPPQ9H008 270 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ATG10Q9H0Y0 220 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 PARVBQ9HBI1 364 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ZNF160Q9HCG1 818 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 CCDC177Q9NQR7 707 aaPredicted RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 ASF1BQ9NVP2 202 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 MRPS2Q9Y399 296 aaKnown RBP11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 CSAG2Q9Y5P2 127 aa11.35□□□□□ -0.59
CCHCR1-215ENST00000488920 IGLV3-12A0A075B6K2 115 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 IDSB3KWA1 339 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 TXNDC9O14530 226 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 MAP2K7O14733 419 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 PRPF4O43172 522 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 AGFG2O95081 481 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 HPP00738 406 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 C8GP07360 202 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 HEXBP07686 556 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 ANXA5P08758 320 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 VARSP26640 1264 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 TBPL1P62380 186 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 MAT1AQ00266 395 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 NAE1Q13564 534 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 MORF4L2Q15014 288 aa11.34□□□□□ -0.59
CCHCR1-215ENST00000488920 PHKG1Q16816 387 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms