RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CDC23Q9UJX2 597 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 NXT1Q9UKK6 140 aaKnown RBP16.93■□□□□ 0.3
ITGB1-215ENST00000488494 SH2B3Q9UQQ2 575 aa16.93■□□□□ 0.3
ITGB1-215ENST00000488494 RUVBL1Q9Y265 456 aaKnown RBP16.93■□□□□ 0.3
ITGB1-215ENST00000488494 TNRC6AQ8NDV7 1962 aaKnown RBP16.93■□□□□ 0.3
ITGB1-215ENST00000488494 PABPN1LA6NDY0 278 aaKnown RBP16.92■□□□□ 0.3
ITGB1-215ENST00000488494 H7BY64 318 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 SLC16A5O15375 505 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 P2RX6O15547 441 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 ALBP02768 609 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 SAT1P21673 171 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 FBLP22087 321 aaKnown RBP16.92■□□□□ 0.3
ITGB1-215ENST00000488494 PRMT9Q6P2P2 845 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 AGTRAPQ6RW13 159 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 MAATS1Q7Z4T9 603 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 STRA8Q7Z7C7 330 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 ZC3HC1Q86WB0 502 aaKnown RBP16.92■□□□□ 0.3
ITGB1-215ENST00000488494 CLEC1AQ8NC01 280 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 COL26A1Q96A83 441 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 ALKBH8Q96BT7 664 aaKnown RBP16.92■□□□□ 0.3
ITGB1-215ENST00000488494 FER1L6-AS2Q96M78 137 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 PRAP1Q96NZ9 151 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 OR2A5Q96R48 311 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 ZNF304Q9HCX3 659 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 GRHL1Q9NZI5 618 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 WHRNQ9P202 907 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 FBXL4Q9UKA2 621 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 VWA7Q9Y334 891 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 ZNF451Q9Y4E5 1061 aa16.92■□□□□ 0.3
ITGB1-215ENST00000488494 FLNCQ14315 2725 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 NUP210LQ5VU65 1888 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 SETXQ7Z333 2677 aaKnown RBP16.91■□□□□ 0.3
ITGB1-215ENST00000488494 MASP2O00187 686 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 STATHP02808 62 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 ZNF37AP17032 561 aaPredicted RBP16.91■□□□□ 0.3
ITGB1-215ENST00000488494 MMP11P24347 488 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 KCNC4Q03721 635 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 SLC26A11Q86WA9 606 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 PRSS58Q8IYP2 241 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 SAYSD1Q9NPB0 183 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 ARL15Q9NXU5 204 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 MOCS1Q9NZB8 636 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 HS3ST3B1Q9Y662 390 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 SEC16AO15027 2179 aa16.91■□□□□ 0.3
ITGB1-215ENST00000488494 FAM95CA0A1B0GW59 222 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 AGPSO00116 658 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 FFAR3O14843 346 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 GPR42O15529 346 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 ALOX12BO75342 701 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 PIAS1O75925 651 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 IGHEP01854 428 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 HIST1H2AGP0C0S8 130 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-215ENST00000488494 HIST1H2ADP20671 130 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 EMP3P54852 163 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 RELAQ04206 551 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 NAE1Q13564 534 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 ZNF460Q14592 562 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 NADK2Q4G0N4 442 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 VWA5B1Q5TIE3 1220 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 DUPD1Q68J44 220 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 ARHGEF39Q8N4T4 335 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 PYROXD1Q8WU10 500 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 HIST1H2AHQ96KK5 128 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 HIST1H2AJQ99878 128 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 H2AFJQ9BTM1 129 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 CRB3Q9BUF7 120 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 SGPP1Q9BX95 441 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 PCBD2Q9H0N5 130 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 ZNF282Q9UDV7 671 aaPredicted RBP16.9■□□□□ 0.3
ITGB1-215ENST00000488494 IKZF3Q9UKT9 509 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 PCM1Q15154 2024 aa16.9■□□□□ 0.3
ITGB1-215ENST00000488494 MED13Q9UHV7 2174 aa16.89■□□□□ 0.3
ITGB1-215ENST00000488494 NPEPPSL1A6NEC2 478 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 VSTM2BA6NLU5 285 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 SOCS6O14544 535 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 CDH1P12830 882 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 CCND1P24385 295 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 HRH2P25021 359 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 AP1S2P56377 157 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 FOXK1P85037 733 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 OCA2Q04671 838 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 KLC1Q07866 573 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 CBLBQ13191 982 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 DSG2Q14126 1118 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 IGFBP7Q16270 282 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 RBBP7Q16576 425 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 SBSNQ6UWP8 590 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 TMEM207Q6UWW9 146 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 C17orf64Q86WR6 236 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 GALNT16Q8N428 558 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 STT3BQ8TCJ2 826 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 MIEF2Q96C03 454 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 MVB12AQ96EY5 273 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 DRC3Q9H069 523 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 SMYD2Q9NRG4 433 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 SEMA3GQ9NS98 782 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 TMEM184CQ9NVA4 438 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 NSMCE4AQ9NXX6 385 aa16.89■□□□□ 0.29
ITGB1-215ENST00000488494 UTP11Q9Y3A2 253 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms