RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
MMP11-210ENST00000488363 ASIC3Q9UHC3 531 aa17.28■□□□□ 0.36
MMP11-210ENST00000488363 PCYOX1Q9UHG3 505 aa17.28■□□□□ 0.36
MMP11-210ENST00000488363 TRMT6Q9UJA5 497 aaKnown RBP17.28■□□□□ 0.36
MMP11-210ENST00000488363 C3orf18Q9UK00 162 aa17.28■□□□□ 0.36
MMP11-210ENST00000488363 HEATR5BQ9P2D3 2071 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 SPTBN1Q01082 2364 aaKnown RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 IGLV3-12A0A075B6K2 115 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 DNALI1O14645 258 aaPredicted RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 PRPF4O43172 522 aaKnown RBP eCLIP17.27■□□□□ 0.36
MMP11-210ENST00000488363 ACPPP15309 386 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 IMPA1P29218 277 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 RELAQ04206 551 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 DHX9Q08211 1270 aaKnown RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 DSG2Q14126 1118 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 VWA2Q5GFL6 755 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 GARNL3Q5VVW2 1013 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 UGT3A1Q6NUS8 523 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 LRRC56Q8IYG6 542 aaPredicted RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 C2CD4AQ8NCU7 369 aaPredicted RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 GABPB2Q8TAK5 448 aaPredicted RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 EBNA1BP2Q99848 306 aaKnown RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 WDR77Q9BQA1 342 aaPredicted RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 YIPF2Q9BWQ6 316 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 LHPPQ9H008 270 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 DDX47Q9H0S4 455 aaKnown RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 ASF1BQ9NVP2 202 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 CUEDC1Q9NWM3 386 aaPredicted RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 TRMT1Q9NXH9 659 aaKnown RBP17.27■□□□□ 0.36
MMP11-210ENST00000488363 TRPC4Q9UBN4 977 aa17.27■□□□□ 0.36
MMP11-210ENST00000488363 DOCK10Q96BY6 2186 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 TXNDC9O14530 226 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 MAP2K7O14733 419 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 HAT1O14929 419 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 TTC4O95801 387 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 HPP00738 406 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 ANXA5P08758 320 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 GLRBP48167 497 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 NR6A1Q15406 480 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 HIF1AQ16665 826 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 EIF2S3LQ2VIR3 472 aaKnown RBP17.26■□□□□ 0.35
MMP11-210ENST00000488363 LRRC8EQ6NSJ5 796 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 IGFL2Q6UWQ7 119 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 PCGF5Q86SE9 256 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 CUZD1Q86UP6 607 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 PPP4R1Q8TF05 950 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 MMABQ96EY8 250 aaPredicted RBP17.26■□□□□ 0.35
MMP11-210ENST00000488363 THOC3Q96J01 351 aaKnown RBP17.26■□□□□ 0.35
MMP11-210ENST00000488363 NDNQ99608 321 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 MESP1Q9BRJ9 268 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 PCDHGA10Q9Y5H3 936 aa17.26■□□□□ 0.35
MMP11-210ENST00000488363 H7BY64 318 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 FFAR3O14843 346 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 GPR42O15529 346 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 SEMA7AO75326 666 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 BANF1O75531 89 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 SLC26A3P40879 764 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 RGS4P49798 205 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 EMP2P54851 167 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 Q0VFX4 171 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 SPANXN3Q5MJ09 141 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 ATG9BQ674R7 924 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 LAPTM4BQ86VI4 370 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 PLD3Q8IV08 490 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 ARHGEF39Q8N4T4 335 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 MCOLN3Q8TDD5 553 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 EEF1AKMT1Q8WVE0 214 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 C8orf44Q96CB5 159 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 PRAP1Q96NZ9 151 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 NAT9Q9BTE0 207 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 DRC3Q9H069 523 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 EPS8L2Q9H6S3 715 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 GRPEL1Q9HAV7 217 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 ZNF160Q9HCG1 818 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 CCDC177Q9NQR7 707 aaPredicted RBP17.25■□□□□ 0.35
MMP11-210ENST00000488363 C14orf105Q9NVL8 296 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 TAS2R13Q9NYV9 303 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 CSAG2Q9Y5P2 127 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 COPG1Q9Y678 874 aaKnown RBP17.25■□□□□ 0.35
MMP11-210ENST00000488363 MDC1Q14676 2089 aaKnown RBP17.25■□□□□ 0.35
MMP11-210ENST00000488363 CNTRLQ7Z7A1 2325 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 NBPF19A0A087WUL8 3843 aa17.25■□□□□ 0.35
MMP11-210ENST00000488363 A0A0A6YYC8 382 aaPredicted RBP17.24■□□□□ 0.35
MMP11-210ENST00000488363 IDSB3KWA1 339 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 I3L1I5 382 aaPredicted RBP17.24■□□□□ 0.35
MMP11-210ENST00000488363 P2RX6O15547 441 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 FOXS1O43638 330 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 C8GP07360 202 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 TCP1P17987 556 aaKnown RBP17.24■□□□□ 0.35
MMP11-210ENST00000488363 HRH2P25021 359 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 TBPL1P62380 186 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 TIAL1Q01085 375 aaKnown RBP eCLIP17.24■□□□□ 0.35
MMP11-210ENST00000488363 NDUFA9Q16795 377 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 BBS9Q3SYG4 887 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 CRB2Q5IJ48 1285 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 NDUFAF7Q7L592 441 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 PALM2Q8IXS6 379 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 AMER3Q8N944 861 aa17.24■□□□□ 0.35
MMP11-210ENST00000488363 PRR7Q8TB68 274 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms