RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PRSS58Q8IYP2 241 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 ZADH2Q8N4Q0 377 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 TM9SF4Q92544 642 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 SLCO2A1Q92959 643 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 MVB12AQ96EY5 273 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 NDNQ99608 321 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 UTP6Q9NYH9 597 aaKnown RBP18.4■□□□□ 0.54
CD55-209ENST00000488171 MAP10Q9P2G4 905 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 ASIC3Q9UHC3 531 aa18.4■□□□□ 0.54
CD55-209ENST00000488171 MDC1Q14676 2089 aaKnown RBP18.39■□□□□ 0.53
CD55-209ENST00000488171 P2RX6O15547 441 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 GP1BBP13224 206 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 IVDP26440 423 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 DSG2Q14126 1118 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 ATG9BQ674R7 924 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 IGFL2Q6UWQ7 119 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 CUZD1Q86UP6 607 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 PLD3Q8IV08 490 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 IGDCC3Q8IVU1 814 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 CISD2Q8N5K1 135 aaKnown RBP18.39■□□□□ 0.53
CD55-209ENST00000488171 AMER3Q8N944 861 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 EEF1AKMT1Q8WVE0 214 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 EBNA1BP2Q99848 306 aaKnown RBP18.39■□□□□ 0.53
CD55-209ENST00000488171 ILKAPQ9H0C8 392 aaPredicted RBP18.39■□□□□ 0.53
CD55-209ENST00000488171 PLAC1Q9HBJ0 212 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 ASF1BQ9NVP2 202 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 TRMT6Q9UJA5 497 aaKnown RBP18.39■□□□□ 0.53
CD55-209ENST00000488171 C3orf18Q9UK00 162 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 ADAMTS6Q9UKP5 1117 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 CDC14AQ9UNH5 594 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 LRRK2Q5S007 2527 aa18.39■□□□□ 0.53
CD55-209ENST00000488171 DOCK10Q96BY6 2186 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 FFAR3O14843 346 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 GPR42O15529 346 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 FOXS1O43638 330 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 SEMA7AO75326 666 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 AGFG2O95081 481 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 TTC4O95801 387 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 SLC26A3P40879 764 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 SNRPNP63162 240 aaKnown RBP18.38■□□□□ 0.53
CD55-209ENST00000488171 HIF1AQ16665 826 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 RBM20Q5T481 1227 aaKnown RBP18.38■□□□□ 0.53
CD55-209ENST00000488171 THEMIS2Q5TEJ8 643 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 AGAP7PQ5VUJ5 663 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 GARNL3Q5VVW2 1013 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 ADCK2Q7Z695 626 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 CNTN4Q8IWV2 1026 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 RERGQ96A58 199 aaPredicted RBP18.38■□□□□ 0.53
CD55-209ENST00000488171 C8orf44Q96CB5 159 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 VPS50Q96JG6 964 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 AGAP4Q96P64 663 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 SLC29A3Q9BZD2 475 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 LHPPQ9H008 270 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 TRPC4Q9UBN4 977 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 PCDHGA10Q9Y5H3 936 aa18.38■□□□□ 0.53
CD55-209ENST00000488171 USP9XQ93008 2570 aaPredicted RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 H7BY64 318 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 HPP00738 406 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 ACPPP15309 386 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 CDKN2DP55273 166 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 EIF2S3LQ2VIR3 472 aaKnown RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 SPANXN3Q5MJ09 141 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 UGT3A1Q6NUS8 523 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 PCGF5Q86SE9 256 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 PPP4R1Q8TF05 950 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 MMABQ96EY8 250 aaPredicted RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 THOC3Q96J01 351 aaKnown RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 PRAP1Q96NZ9 151 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 BARD1Q99728 777 aaKnown RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 WDR77Q9BQA1 342 aaPredicted RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 ZNF160Q9HCG1 818 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 CCDC177Q9NQR7 707 aaPredicted RBP18.37■□□□□ 0.53
CD55-209ENST00000488171 TAS2R13Q9NYV9 303 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 SLC17A6Q9P2U8 582 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 PDE10AQ9Y233 779 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 NTNG1Q9Y2I2 539 aa18.37■□□□□ 0.53
CD55-209ENST00000488171 A0A0A6YYC8 382 aaPredicted RBP18.36■□□□□ 0.53
CD55-209ENST00000488171 USP27XA6NNY8 438 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 IDSB3KWA1 339 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 I3L1I5 382 aaPredicted RBP18.36■□□□□ 0.53
CD55-209ENST00000488171 TXNDC9O14530 226 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 MAP2K7O14733 419 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 PRPF4O43172 522 aaKnown RBP eCLIP18.36■□□□□ 0.53
CD55-209ENST00000488171 AHSGP02765 367 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 TCP1P17987 556 aaKnown RBP18.36■□□□□ 0.53
CD55-209ENST00000488171 TBPL1P62380 186 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 NR6A1Q15406 480 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 IRAK1BP1Q5VVH5 260 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 LRRC8EQ6NSJ5 796 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 PAQR3Q6TCH7 311 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 MBOAT1Q6ZNC8 495 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 CERS2Q96G23 380 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 CCDC138Q96M89 665 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 NAT9Q9BTE0 207 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 TGIF2Q9GZN2 237 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 DRC3Q9H069 523 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 TMEM184CQ9NVA4 438 aa18.36■□□□□ 0.53
CD55-209ENST00000488171 NOVA2Q9UNW9 492 aaKnown RBP18.36■□□□□ 0.53
CD55-209ENST00000488171 SH2B3Q9UQQ2 575 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms