RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TDRD6O60522 2096 aaKnown RBP3.12□□□□□ -1.91
SMC4-219ENST00000487747 IGKV6D-21A0A0A0MT36 114 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 A0A1W2PPQ1 181 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 A0A1W2PQ72 361 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 CCDC189A1A4V9 331 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 O00370 1275 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 KRT33AO76009 404 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 LMAN1P49257 510 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 TRIM29Q14134 588 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 PRR30Q53SZ7 412 aaPredicted RBP3.11□□□□□ -1.91
SMC4-219ENST00000487747 PLEKHS1Q5SXH7 462 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 FHL5Q5TD97 284 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 DMKNQ6E0U4 476 aaPredicted RBP3.11□□□□□ -1.91
SMC4-219ENST00000487747 C17orf53Q8N3J3 647 aaPredicted RBP3.11□□□□□ -1.91
SMC4-219ENST00000487747 C11orf42Q8N5U0 333 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 RHOXF1Q8NHV9 184 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 PIK3R3Q92569 461 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 FAM120BQ96EK7 910 aaKnown RBP3.11□□□□□ -1.91
SMC4-219ENST00000487747 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 ATF6BQ99941 703 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 MTMR12Q9C0I1 747 aa3.11□□□□□ -1.91
SMC4-219ENST00000487747 PRMT7Q9NVM4 692 aaPredicted RBP3.11□□□□□ -1.91
SMC4-219ENST00000487747 IGHV3-20A0A0C4DH32 117 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 ERAL1O75616 437 aaKnown RBP3.1□□□□□ -1.91
SMC4-219ENST00000487747 SLCO2B1O94956 709 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 PCP11498 1178 aaKnown RBP3.1□□□□□ -1.91
SMC4-219ENST00000487747 FKBP3Q00688 224 aaKnown RBP3.1□□□□□ -1.91
SMC4-219ENST00000487747 MC1RQ01726 317 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 CREB5Q02930 508 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 FCRLAQ7L513 359 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 ZC3H3Q8IXZ2 948 aaKnown RBP3.1□□□□□ -1.91
SMC4-219ENST00000487747 FAM89BQ8N5H3 189 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 OR52B6Q8NGF0 335 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 OR10S1Q8NGN2 331 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.1□□□□□ -1.91
SMC4-219ENST00000487747 NSMAFQ92636 917 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 DNAI2Q9GZS0 605 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 EGLN3Q9H6Z9 239 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 JPT2Q9H910 190 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 CRNNQ9UBG3 495 aaPredicted RBP3.1□□□□□ -1.91
SMC4-219ENST00000487747 PRDM4Q9UKN5 801 aa3.1□□□□□ -1.91
SMC4-219ENST00000487747 A0A1W2PPK0 400 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 A0A1W2PPM1 405 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 IRF2P14316 349 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.91
SMC4-219ENST00000487747 TRAP1Q12931 704 aaKnown RBP3.09□□□□□ -1.91
SMC4-219ENST00000487747 OR4C11Q6IEV9 310 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 OR4A47Q6IF82 309 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 EXOC8Q8IYI6 725 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 CFAP61Q8NHU2 1237 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 ZIM3Q96PE6 472 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 UBAC1Q9BSL1 405 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 PI4K2AQ9BTU6 479 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 NYAP2Q9P242 653 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 SELENOKQ9Y6D0 94 aa3.09□□□□□ -1.91
SMC4-219ENST00000487747 MTMR11A4FU01 709 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 CASTOR2A6NHX0 329 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 C2CD4DB7Z1M9 353 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 SURF4O15260 269 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 ENTPD3O75355 529 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 BAG3O95817 575 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 MYOGP15173 224 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 DCDC1P59894 354 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 PRKG2Q13237 762 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 SGCGQ13326 291 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 CBWD6Q4V339 395 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 CBWD3Q5JTY5 395 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 PRR27Q6MZM9 219 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 FAM198BQ6UWH4 519 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 CCBE1Q6UXH8 406 aaPredicted RBP3.08□□□□□ -1.92
SMC4-219ENST00000487747 RNF130Q86XS8 419 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 NDUFAF2Q8N183 169 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 MCUQ8NE86 351 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 ZNF622Q969S3 477 aaKnown RBP eCLIP3.08□□□□□ -1.921e-7■■□□□ 12.5
SMC4-219ENST00000487747 SLC22A18Q96BI1 424 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 CHCHD6Q9BRQ6 235 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 SLC2A11Q9BYW1 496 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 SYNCQ9H7C4 482 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 PLCL2Q9UPR0 1127 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 FER1L5A0AVI2 2057 aa3.08□□□□□ -1.92
SMC4-219ENST00000487747 KRT6AP02538 564 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 PRB2P02812 416 aaPredicted RBP3.07□□□□□ -1.92
SMC4-219ENST00000487747 THY1P04216 161 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 KRT6BP04259 564 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 RAB40ALP0C0E4 278 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 PFKFB1P16118 471 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 ZNF19P17023 458 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 KRT6CP48668 564 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 ALDH3A2P51648 485 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 STAT2P52630 851 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 HSPB3Q12988 150 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 SRSF9Q13242 221 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMC4-219ENST00000487747 CAPRIN1Q14444 709 aaKnown RBP3.07□□□□□ -1.92
SMC4-219ENST00000487747 SNAPC1Q16533 368 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 ALDH1L2Q3SY69 923 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 FAM182AQ5T1J6 154 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 RNLSQ5VYX0 342 aa3.07□□□□□ -1.92
SMC4-219ENST00000487747 CCDC70Q6NSX1 233 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms