RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PRR27Q6MZM9 219 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 FAM180BQ6P0A1 224 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 RPAP2Q8IXW5 612 aaPredicted RBP3.02□□□□□ -1.93
CCDC66-221ENST00000487739 OR4D10Q8NGI6 311 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 CHURC1Q8WUH1 139 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 ATL1Q8WXF7 558 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 ZNF622Q969S3 477 aaKnown RBP eCLIP3.02□□□□□ -1.932e-6■■□□□ 14.2
CCDC66-221ENST00000487739 MPP4Q96JB8 637 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 FAM71F1Q96KD3 344 aaPredicted RBP3.02□□□□□ -1.93
CCDC66-221ENST00000487739 ADNPQ9H2P0 1102 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 Q9H8V8 135 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 JPT2Q9H910 190 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 TNFRSF19Q9NS68 423 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 B4GALT7Q9UBV7 327 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 PRDM4Q9UKN5 801 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 ELF5Q9UKW6 265 aaPredicted RBP3.02□□□□□ -1.93
CCDC66-221ENST00000487739 VSIG4Q9Y279 399 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 WDR83OSQ9Y284 106 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 A0A087WWV3 80 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 TRBV4-1A0A0J9YWV2 114 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 TRAFD1O14545 582 aaPredicted RBP3.01□□□□□ -1.93
CCDC66-221ENST00000487739 OGTO15294 1046 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 RAB40ALP0C0E4 278 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 MYOGP15173 224 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 DCDC1P59894 354 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 POU5F1Q01860 360 aaKnown RBP3.01□□□□□ -1.93
CCDC66-221ENST00000487739 TRA2AQ13595 282 aaKnown RBP eCLIP3.01□□□□□ -1.93
CCDC66-221ENST00000487739 PCLAFQ15004 111 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 SNAPC1Q16533 368 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 NTRK2Q16620 822 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 CBWD6Q4V339 395 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 CBWD3Q5JTY5 395 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 FHL5Q5TD97 284 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 MINDY1Q8N5J2 469 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 RHOXF1Q8NHV9 184 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 NXNL1Q96CM4 212 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 NAP1L4Q99733 375 aaKnown RBP3.01□□□□□ -1.93
CCDC66-221ENST00000487739 MRPL1Q9BYD6 325 aaKnown RBP3.01□□□□□ -1.93
CCDC66-221ENST00000487739 PRRG4Q9BZD6 226 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 MYNNQ9NPC7 610 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 IL17BQ9UHF5 180 aa3.01□□□□□ -1.93
CCDC66-221ENST00000487739 A0A1W2PPQ1 181 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 C2CD4DB7Z1M9 353 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 SLC1A7O00341 560 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 ZNF354AO60765 605 aaPredicted RBP3□□□□□ -1.93
CCDC66-221ENST00000487739 WDHD1O75717 1129 aaPredicted RBP3□□□□□ -1.93
CCDC66-221ENST00000487739 PFKFB1P16118 471 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 AADACP22760 399 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 HNRNPKP61978 463 aaKnown RBP eCLIP3□□□□□ -1.93
CCDC66-221ENST00000487739 FKBP3Q00688 224 aaKnown RBP3□□□□□ -1.93
CCDC66-221ENST00000487739 SRSF9Q13242 221 aaKnown RBP eCLIP3□□□□□ -1.93
CCDC66-221ENST00000487739 CUL3Q13618 768 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 VEZF1Q14119 521 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 ZNF146Q15072 292 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 RNLSQ5VYX0 342 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 MAATS1Q7Z4T9 603 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 CATSPER3Q86XQ3 398 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 NOA1Q8NC60 698 aaKnown RBP3□□□□□ -1.93
CCDC66-221ENST00000487739 KLHL30-AS1Q8NEE0 82 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 APPL2Q8NEU8 664 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 OR52B6Q8NGF0 335 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 METTL21AQ8WXB1 218 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 PIK3R3Q92569 461 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 NSMAFQ92636 917 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 MOB3AQ96BX8 217 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 GIMAP4Q9NUV9 329 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 NLGN3Q9NZ94 848 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 BAIAP2L1Q9UHR4 511 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 POMT2Q9UKY4 750 aa3□□□□□ -1.93
CCDC66-221ENST00000487739 A6NCN8 305 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 DOK2O60496 412 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 TSPAN9O75954 239 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 LINGO3P0C6S8 592 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 PCP11498 1178 aaKnown RBP2.99□□□□□ -1.93
CCDC66-221ENST00000487739 KLK2P20151 261 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 FAM198BQ6UWH4 519 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 SLC24A5Q71RS6 500 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 UBAC1Q9BSL1 405 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 SLITRK2Q9H156 845 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.99□□□□□ -1.93
CCDC66-221ENST00000487739 CRNNQ9UBG3 495 aaPredicted RBP2.99□□□□□ -1.93
CCDC66-221ENST00000487739 ZNF256Q9Y2P7 627 aaPredicted RBP2.99□□□□□ -1.93
CCDC66-221ENST00000487739 KIF25-AS1Q9Y6Z4 181 aa2.99□□□□□ -1.93
CCDC66-221ENST00000487739 IGHV3-38A0A0C4DH36 116 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 TLX2O43763 284 aaPredicted RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 SH3BP5O60239 455 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 CD27P26842 260 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 KHKP50053 298 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 ATP4BP51164 291 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 NDST2P52849 883 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 LYZP61626 148 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 UBXN2AP68543 259 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 BAATQ14032 418 aaPredicted RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 RSBN1Q5VWQ0 802 aaPredicted RBP2.98□□□□□ -1.93
CCDC66-221ENST00000487739 OLFML2AQ68BL7 652 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 RAPH1Q70E73 1250 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 GPC2Q8N158 579 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 TEX19Q8NA77 164 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 CFAP61Q8NHU2 1237 aa2.98□□□□□ -1.93
CCDC66-221ENST00000487739 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms