RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ARHGEF18Q6ZSZ5 1173 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 CRLF3Q8IUI8 442 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 CFAP206Q8IYR0 622 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 HORMAD2Q8N7B1 307 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 POGLUT1Q8NBL1 392 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 PHC3Q8NDX5 983 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 PBKQ96KB5 322 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 CALR3Q96L12 384 aaKnown RBP11.02□□□□□ -0.65
TRIM56-204ENST00000487252 TSGA13Q96PP4 275 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 SH3GL2Q99962 352 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 BPIFA1Q9NP55 256 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 OR6C2Q9NZP2 312 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 TTLL3Q9Y4R7 772 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 SPO11Q9Y5K1 396 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 FAM215AQ9Y5M1 114 aa11.02□□□□□ -0.65
TRIM56-204ENST00000487252 MGAM2Q2M2H8 2515 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRIM56-204ENST00000487252 SPRY1O43609 319 aaPredicted RBP11.01□□□□□ -0.65
TRIM56-204ENST00000487252 SMPD2O60906 423 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 FTCDO95954 541 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 DESP17661 470 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 MAGP20916 626 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 CCNCP24863 283 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 ADH7P40394 386 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 NAP1L1P55209 391 aaKnown RBP11.01□□□□□ -0.65
TRIM56-204ENST00000487252 DMTNQ08495 405 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 PRKG2Q13237 762 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 TERF2Q15554 542 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 MEP1AQ16819 746 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 ZDHHC20Q5W0Z9 365 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 RTL6Q6ICC9 239 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 CCDC70Q6NSX1 233 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 DCUN1D2Q6PH85 259 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 ZNF227Q86WZ6 799 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 OR5M3Q8NGP4 307 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 C16orf52Q8NHV5 167 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 HM13Q8TCT9 377 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 AENQ8WTP8 325 aaKnown RBP11.01□□□□□ -0.65
TRIM56-204ENST00000487252 TMEM125Q96AQ2 219 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 AGPAT1Q99943 283 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 HGH1Q9BTY7 390 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 TGIF2Q9GZN2 237 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 HAUS2Q9NVX0 235 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRIM56-204ENST00000487252 FAM8A1Q9UBU6 413 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 ABCA1O95477 2261 aa11.01□□□□□ -0.65
TRIM56-204ENST00000487252 PRMT3O60678 531 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 SLC25A12O75746 678 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 HRGP04196 525 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 PSMA2P25787 234 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 ACVR2AP27037 513 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 ARL4AP40617 200 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 ST13P50502 369 aaKnown RBP11□□□□□ -0.65
TRIM56-204ENST00000487252 CASP8Q14790 479 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 RPS6KA1Q15418 735 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 TAZQ16635 292 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 MAPKAPK3Q16644 382 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 GXYLT1Q4G148 440 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 CCDC181Q5TID7 509 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 KAZNQ674X7 775 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 UNC5DQ6UXZ4 953 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 DET1Q7L5Y6 550 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 SYCE1Q8N0S2 351 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 RASGEF1CQ8N431 466 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 TTC29Q8NA56 475 aaPredicted RBP11□□□□□ -0.65
TRIM56-204ENST00000487252 OR10Q1Q8NGQ4 319 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 ACTRT1Q8TDG2 376 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 NAT14Q8WUY8 206 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 SRPK1Q96SB4 655 aaKnown RBP11□□□□□ -0.65
TRIM56-204ENST00000487252 LRRC1Q9BTT6 524 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 ISCUQ9H1K1 167 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 TRIM45Q9H8W5 580 aaPredicted RBP11□□□□□ -0.65
TRIM56-204ENST00000487252 C14orf105Q9NVL8 296 aa11□□□□□ -0.65
TRIM56-204ENST00000487252 TTC7AQ9ULT0 858 aaPredicted RBP11□□□□□ -0.65
TRIM56-204ENST00000487252 HYKKA2RU49 373 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 CLCA1A8K7I4 914 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 GABRR3A8MPY1 467 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 H3BQF6 201 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 TFECO14948 347 aaPredicted RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 CNOT4O95628 575 aaKnown RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 MSH3P20585 1137 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 TACR1P25103 407 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 IL1R2P27930 398 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 UQCRC1P31930 480 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 CXCR5P32302 372 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 PRLHRP49683 370 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 NR0B1P51843 470 aaKnown RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 MAMLD1Q13495 774 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 ITGA9Q13797 1035 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 KIR2DS3Q14952 304 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 ZC3H12BQ5HYM0 836 aaKnown RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
TRIM56-204ENST00000487252 FBXW10Q5XX13 1052 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 FAM151BQ6UXP7 276 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 B3GNT6Q6ZMB0 384 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 NT5DC3Q86UY8 548 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 LGI4Q8N135 537 aa10.99□□□□□ -0.65
TRIM56-204ENST00000487252 CNTD1Q8N815 330 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms