RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 LRRC39Q96DD0 335 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 CERS2Q96G23 380 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 CAPZA3Q96KX2 299 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 CCDC138Q96M89 665 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 RUVBL1Q9Y265 456 aaKnown RBP18.19■□□□□ 0.5
CLIP2-206ENST00000487091 SAR1BQ9Y6B6 198 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 LRRK2Q5S007 2527 aa18.19■□□□□ 0.5
CLIP2-206ENST00000487091 CNTRLQ7Z7A1 2325 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PRRC2CQ9Y520 2896 aaKnown RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 MASP2O00187 686 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 SLC16A5O15375 505 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PRPF4O43172 522 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 FBLP22087 321 aaKnown RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 DR1Q01658 176 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 KLC1Q07866 573 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 SP140Q13342 867 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PAQR3Q6TCH7 311 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 SHISA6Q6ZSJ9 500 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 KLHL7Q8IXQ5 586 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PALM2Q8IXS6 379 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 ARHGEF39Q8N4T4 335 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 FAM26EQ8N5C1 309 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PDLIM2Q96JY6 352 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 NAPGQ99747 312 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 CRB3Q9BUF7 120 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PCBD2Q9H0N5 130 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 SYNPO2LQ9H987 977 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PARVBQ9HBI1 364 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PLAC1Q9HBJ0 212 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 CCDC177Q9NQR7 707 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 TMEM184CQ9NVA4 438 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 STOX2Q9P2F5 926 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 CORO1CQ9ULV4 474 aaPredicted RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 PDE10AQ9Y233 779 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 B3GNT3Q9Y2A9 372 aa18.18■□□□□ 0.5
CLIP2-206ENST00000487091 SPENQ96T58 3664 aaKnown RBP18.18■□□□□ 0.5
CLIP2-206ENST00000487091 ESPL1Q14674 2120 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 CCDC188H7C350 402 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 ITGA3P26006 1051 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 ELK3P41970 407 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 CDKN2DP55273 166 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 SRSF1Q07955 248 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLIP2-206ENST00000487091 DSG2Q14126 1118 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 FRG1Q14331 258 aaKnown RBP18.17■□□□□ 0.5
CLIP2-206ENST00000487091 HKDC1Q2TB90 917 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 TUBB8Q3ZCM7 444 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 PLEKHN1Q494U1 663 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-206ENST00000487091 RBM20Q5T481 1227 aaKnown RBP18.17■□□□□ 0.5
CLIP2-206ENST00000487091 TEDDM1Q5T9Z0 273 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 HIBCHQ6NVY1 386 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-206ENST00000487091 ADCK2Q7Z695 626 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 MYO1HQ8N1T3 1032 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 ZADH2Q8N4Q0 377 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 OR11G2Q8NGC1 345 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 ABCF3Q9NUQ8 709 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 CUEDC1Q9NWM3 386 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-206ENST00000487091 RNF14Q9UBS8 474 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 ADAMTS6Q9UKP5 1117 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 TEX264Q9Y6I9 313 aa18.17■□□□□ 0.5
CLIP2-206ENST00000487091 H7BY64 318 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 HAT1O14929 419 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 SLC26A3P40879 764 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 PAFAH1B1P43034 410 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 FAM53BQ14153 422 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 ATG9BQ674R7 924 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 STEAP4Q687X5 459 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 THAP11Q96EK4 314 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 PWWP2AQ96N64 755 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 PRAP1Q96NZ9 151 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 PPANQ9NQ55 473 aaKnown RBP18.16■□□□□ 0.5
CLIP2-206ENST00000487091 C14orf105Q9NVL8 296 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 LUZP4Q9P127 313 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 C3orf18Q9UK00 162 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 VWA7Q9Y334 891 aa18.16■□□□□ 0.5
CLIP2-206ENST00000487091 KCNE1BA0A087WTH5 132 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 FOXS1O43638 330 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 SEC31AO94979 1220 aaKnown RBP18.15■□□□□ 0.5
CLIP2-206ENST00000487091 HPP00738 406 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 HIST1H2AGP0C0S8 130 aaPredicted RBP18.15■□□□□ 0.5
CLIP2-206ENST00000487091 HIST1H2ADP20671 130 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 CCND1P24385 295 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 ITGA8P53708 1063 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 ARL4CP56559 192 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 IL2P60568 153 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 RPS15AP62244 130 aaKnown RBP18.15■□□□□ 0.5
CLIP2-206ENST00000487091 TBPL1P62380 186 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 HIF1AQ16665 826 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 NDUFA9Q16795 377 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 VWA2Q5GFL6 755 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 IRAK1BP1Q5VVH5 260 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 AGTRAPQ6RW13 159 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 IGFL2Q6UWQ7 119 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 Q6ZS92 163 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 IQCKQ8N0W5 287 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 AMER3Q8N944 861 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 MMABQ96EY8 250 aaPredicted RBP18.15■□□□□ 0.5
CLIP2-206ENST00000487091 LINGO1Q96FE5 620 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 HIST1H2AHQ96KK5 128 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 HIST1H2AJQ99878 128 aa18.15■□□□□ 0.5
CLIP2-206ENST00000487091 H2AFJQ9BTM1 129 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms