RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NEK2P51955 445 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 CLNS1AP54105 237 aaKnown RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 ACTR1AP61163 376 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PSME3P61289 254 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 UFM1P61960 85 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 HMGCS1Q01581 520 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 FOXM1Q08050 763 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 ACSM2AQ08AH3 577 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 DDX39BQ13838 428 aaKnown RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 RCAN2Q14206 197 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 GAS6Q14393 721 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 SLBPQ14493 270 aaKnown RBP eCLIP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 CLCA4Q14CN2 919 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 RPE65Q16518 533 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 ALG11Q2TAA5 492 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 C1orf146Q5VVC0 180 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 ACSM2BQ68CK6 577 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 DUS1LQ6P1R4 473 aaKnown RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PGM2L1Q6PCE3 622 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 SLC36A4Q6YBV0 504 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 LAS2Q8IYD9 372 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PHACTR4Q8IZ21 702 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 FBXW8Q8N3Y1 598 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 LIX1Q8N485 282 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 TBC1D19Q8N5T2 526 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 CADM4Q8NFZ8 388 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PJA1Q8NG27 643 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 OR13H1Q8NG92 308 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 OR7G3Q8NG95 312 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 OR2L8Q8NGY9 312 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 STARD8Q92502 1023 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 STMN2Q93045 179 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 TSACCQ96A04 125 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 CLDN23Q96B33 292 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 CXorf40BQ96DE9 158 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PDXPQ96GD0 296 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 IL17FQ96PD4 163 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 CDRT15Q96T59 188 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 HOPXQ9BPY8 73 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 AIF1LQ9BQI0 150 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 GSDMCQ9BYG8 508 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 KIR3DX1Q9H7L2 352 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 EBF2Q9HAK2 575 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PRDM8Q9NQV8 689 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 AASDHPPTQ9NRN7 309 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 SPATA6Q9NWH7 488 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 TAC3Q9UHF0 121 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PCOLCE2Q9UKZ9 415 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PLAGL1Q9UM63 463 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 RUVBL1Q9Y265 456 aaKnown RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 WDR37Q9Y2I8 494 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 TSC22D4Q9Y3Q8 395 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 PCDHB11Q9Y5F2 797 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 DGKBQ9Y6T7 804 aa6.8□□□□□ -1.32
SF3A3-206ENST00000487062 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.8□□□□□ -1.32
SF3A3-206ENST00000487062 C15orf38-AP3S2A0A0A6YYH1 394 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 SPTY2D1-AS1A0A0U1RR47 76 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 PIPSLA2A3N6 862 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 ANKDD1BA6NHY2 528 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 OR5K4A6NMS3 321 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 A8MUI8 341 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 FOXE1O00358 373 aaPredicted RBP6.79□□□□□ -1.32
SF3A3-206ENST00000487062 TRIM38O00635 465 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 EEDO75530 441 aaKnown RBP6.79□□□□□ -1.32
SF3A3-206ENST00000487062 STAMBPO95630 424 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 IL6P05231 212 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 BCKDHAP12694 445 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CDH1P12830 882 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 F3P13726 295 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 AMD1P17707 334 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CD22P20273 847 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CAPN3P20807 821 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 ME2P23368 584 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 HRH2P25021 359 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CD27P26842 260 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 AK4P27144 223 aaPredicted RBP6.79□□□□□ -1.32
SF3A3-206ENST00000487062 SHMT2P34897 504 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 PIK3CBP42338 1070 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 ASMTP46597 345 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CXCL12P48061 93 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 MTTPP55157 894 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CLDN8P56748 225 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 ABATP80404 500 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 KPNB1Q14974 876 aaKnown RBP6.79□□□□□ -1.32
SF3A3-206ENST00000487062 KIAA0040Q15053 153 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CCDC6Q16204 474 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 VPS26BQ4G0F5 336 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 USP39Q53GS9 565 aaKnown RBP6.79□□□□□ -1.32
SF3A3-206ENST00000487062 SPIN4Q56A73 249 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 SAMD4BQ5PRF9 694 aaKnown RBP6.79□□□□□ -1.32
SF3A3-206ENST00000487062 CATSPEREQ5SY80 951 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 ICE2Q659A1 982 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 NOXRED1Q6NXP6 359 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 SLC30A9Q6PML9 568 aa6.79□□□□□ -1.32
SF3A3-206ENST00000487062 TMIGD1Q6UXZ0 262 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms