RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C21orf59P57076 290 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ACTR1AP61163 376 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 OGFOD2Q6N063 350 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ZCCHC7Q8N3Z6 543 aaKnown RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 LILRA3Q8N6C8 439 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 OR2T11Q8NH01 316 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 BTN2A2Q8WVV5 523 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 MYRFLQ96LU7 910 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 INPP5KQ9BT40 448 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 KLHL3Q9UH77 587 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ZNF451Q9Y4E5 1061 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 OR1A2Q9Y585 309 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 HCFC2Q9Y5Z7 792 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CACNG3O60359 315 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 C6orf47O95873 294 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CHRM5P08912 532 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 C6P13671 934 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 AMD1P17707 334 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 KELP23276 732 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 SLC6A11P48066 632 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 GALK1P51570 392 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 RAB8AP61006 207 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 FOXM1Q08050 763 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 MEP1AQ16819 746 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 PLEKHS1Q5SXH7 462 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ENPP7Q6UWV6 458 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 HS3ST5Q8IZT8 346 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 LILRA2Q8N149 483 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 TTC29Q8NA56 475 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 LEMD2Q8NC56 503 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 PROKR1Q8TCW9 393 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 USP7Q93009 1102 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 EPB41L1Q9H4G0 881 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 RAD21L1Q9H4I0 556 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 FZD3Q9NPG1 666 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 IFT80Q9P2H3 777 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CORO2BQ9UQ03 480 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 SLC27A6Q9Y2P4 619 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 LYVE1Q9Y5Y7 322 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 MYO10Q9HD67 2058 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 TOR1BO14657 336 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 EEDO75530 441 aaKnown RBP12.82□□□□□ -0.36
HMGN1-216ENST00000486741 IGLV3-27P01718 113 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 DEPDC1Q5TB30 811 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ERICH5Q6P6B1 374 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 LRRTM4Q86VH4 590 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 SLC9A6Q92581 669 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ZUFSPQ96AP4 578 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CMTM7Q96FZ5 175 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 EFCAB11Q9BUY7 163 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 PDFQ9HBH1 243 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ELK4P28324 431 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CLCN7P51798 805 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 DUOXA1Q1HG43 343 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 AAK1Q2M2I8 961 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 SVOPQ8N4V2 548 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 DTWD1Q8N5C7 304 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 RAB8BQ92930 207 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 CEP295NLQ96MC4 621 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 TRPS1Q9UHF7 1281 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 ACSL6Q9UKU0 697 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 MAPRE3Q9UPY8 281 aa12.82□□□□□ -0.36
HMGN1-216ENST00000486741 PRSS51A0A1B0GVH4 220 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 C8orf89P0DMQ9 161 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TBPL1P62380 186 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 MED22Q15528 200 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 CATSPEREQ5SY80 951 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ERN2Q76MJ5 926 aaKnown RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 GATAD2AQ86YP4 633 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 OR9A1PQ8NGU1 263 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ZNF514Q96K75 400 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 PKP4Q99569 1192 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TOR3AQ9H497 397 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 DPEP2Q9H4A9 486 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ITM2CQ9NQX7 267 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 SMOXQ9NWM0 555 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 RHCGQ9UBD6 479 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 INTS6Q9UL03 887 aaKnown RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 CCDC85CA6NKD9 419 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 RB1P06400 928 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TRPC1P48995 793 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 CCDC157Q569K6 752 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ATG14Q6ZNE5 492 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 Q6ZSR9 355 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TRAM1L1Q8N609 369 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 MAL2Q969L2 176 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TMEM125Q96AQ2 219 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ARMC5Q96C12 935 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 GPRC5BQ9NZH0 403 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 TMEM181Q9P2C4 612 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 ARSFP54793 590 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 SLC7A9P82251 487 aa12.81□□□□□ -0.36
HMGN1-216ENST00000486741 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
HMGN1-216ENST00000486741 RFX4Q33E94 735 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms