RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC22A18Q96BI1 424 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 MAP3K3Q99759 626 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 SHCBP1LQ9BZQ2 653 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 C20orf27Q9GZN8 174 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 DRC3Q9H069 523 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 KLHL25Q9H0H3 589 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 SYNDIG1Q9H7V2 258 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 MANSC1Q9H8J5 431 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 IPPKQ9H8X2 491 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 KLHL3Q9UH77 587 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 ZNF225Q9UK10 706 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 DYRK1BQ9Y463 629 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 ANGPTL3Q9Y5C1 460 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 KCNE2Q9Y6J6 123 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 MGAQ8IWI9 3026 aa12.29□□□□□ -0.44
HDAC6-229ENST00000486665 H7BY64 318 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 POLR3GO15318 223 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 ZW10O43264 779 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 NRP2O60462 931 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 LYPLA1O75608 230 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 CPNE6O95741 557 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 C9P02748 559 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 CHRNGP07510 517 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 CMPK1P30085 196 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 GRIA3P42263 894 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 ERVPABLB-1P60509 514 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 ABATP80404 500 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 GUCY1A3Q02108 690 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 BST1Q10588 318 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 RCN2Q14257 317 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 ZIC1Q15915 447 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 RBBP7Q16576 425 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 ARL13AQ5H913 290 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 SNAP47Q5SQN1 464 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 FCRL6Q6DN72 434 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 TMEM71Q6P5X7 295 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 FIGLAQ6QHK4 219 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 NXPE4Q6UWF7 544 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 SYVN1Q86TM6 617 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 PLXDC1Q8IUK5 500 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 DCBLD1Q8N8Z6 715 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 SREK1Q8WXA9 508 aaKnown RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 ZDHHC12Q96GR4 267 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 PRR11Q96HE9 360 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 CNDP1Q96KN2 507 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 PRAP1Q96NZ9 151 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 TRAPPC9Q96Q05 1148 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 DPH7Q9BTV6 452 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 SEMA6CQ9H3T2 930 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 TNFRSF12AQ9NP84 129 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 MRPS30Q9NP92 439 aaKnown RBP12.28□□□□□ -0.44
HDAC6-229ENST00000486665 GPRC5BQ9NZH0 403 aa12.28□□□□□ -0.44
HDAC6-229ENST00000486665 TENM4Q6N022 2769 aa12.27□□□□□ -0.44
HDAC6-229ENST00000486665 IGHV5-51A0A0C4DH38 117 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 A0A0J9YY10 115 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 SLC9B1P1A6NJY1 282 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 A8MU76 341 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 MATN2O00339 956 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CLGNO14967 610 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 H2AFYO75367 372 aaKnown RBP12.27□□□□□ -0.45
HDAC6-229ENST00000486665 KATNA1O75449 491 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 RFPL3O75679 317 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 C1QL1O75973 258 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 WFS1O76024 890 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CCNDBP1O95273 360 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 C1GALT1C1LP0DN25 315 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ST6GAL1P15907 406 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 GNAZP19086 355 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CD22P20273 847 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CDH3P22223 829 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 GRK2P25098 689 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 MDH1P40925 334 aaKnown RBP12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CASP2P42575 452 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 SLC1A6P48664 564 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 PIK3CGP48736 1102 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CCNG1P51959 295 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ABCE1P61221 599 aaKnown RBP12.27□□□□□ -0.45
HDAC6-229ENST00000486665 SH3BP2P78314 561 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CSNK1G2P78368 415 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 MEF2AQ02078 507 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-229ENST00000486665 IRF8Q02556 426 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 PCDH1Q08174 1060 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 LCP2Q13094 533 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 TRAF3Q13114 568 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 CHIT1Q13231 466 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 DOC2AQ14183 400 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 XKR6Q5GH73 641 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ATG9BQ674R7 924 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF425Q6IV72 752 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 FBXO42Q6P3S6 717 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 MILR1Q7Z6M3 343 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 TMPRSS11BQ86T26 416 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 PAQR7Q86WK9 346 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 TMPRSS12Q86WS5 348 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 FAM129CQ86XR2 697 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 TRIM42Q8IWZ5 723 aa12.27□□□□□ -0.45
HDAC6-229ENST00000486665 ABHD11Q8NFV4 315 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms