RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PNLIPRP1P54315 467 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 MTTPP55157 894 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 RPL38P63173 70 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 E2F2Q14209 437 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 KPNB1Q14974 876 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 RFTN2Q52LD8 501 aaPredicted RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 PYCR3Q53H96 274 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 SGO1Q5FBB7 561 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 PRAMEF14Q5SWL7 426 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 C1orf146Q5VVC0 180 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 IL23RQ5VWK5 629 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 FRG2Q64ET8 278 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 CAPRIN2Q6IMN6 1127 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 BLOC1S3Q6QNY0 202 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 PIP4P1Q86T03 277 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 TMEM145Q8NBT3 493 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 PPFIBP2Q8ND30 876 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 OR5K2Q8NHB8 316 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 SETD7Q8WTS6 366 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 KLHDC7BQ96G42 594 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 SCARF2Q96GP6 870 aaPredicted RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 FRG2BQ96QU4 278 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 OR4K3Q96R72 315 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 SGPP1Q9BX95 441 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 TRIT1Q9H3H1 467 aaKnown RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 LRTM1Q9HBL6 345 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 CCDC177Q9NQR7 707 aaPredicted RBP14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 C1orf109Q9NX04 203 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 PSMD13Q9UNM6 376 aa14.1□□□□□ -0.15
POLR2J3-204ENST00000486319 KNL1Q8NG31 2342 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ZNF839A8K0R7 811 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 E7ENX8 843 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 E7EQ34 232 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 H0Y8X5 98 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 H0YIV9 168 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 SH3BP5O60239 455 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 PRAMEF4O60810 478 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ENTPD5O75356 428 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 SEC22BO75396 215 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 FUCA1P04066 466 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 IDSP22304 550 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 NXPH1P58417 271 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 HMGCS1Q01581 520 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 TAP2Q03519 686 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 CSTF3Q12996 717 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 DOC2AQ14183 400 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 RCAN2Q14206 197 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ARHGAP19Q14CB8 494 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 SUZ12Q15022 739 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ZNF423Q2M1K9 1284 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 CACHD1Q5VU97 1274 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 PRAMEF9Q5VWM5 478 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 CYP20A1Q6UW02 462 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ZFAND4Q86XD8 727 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 LRRC56Q8IYG6 542 aaPredicted RBP14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 TBC1D21Q8IYX1 336 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 FAM9CQ8IZT9 166 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 RAB42Q8N4Z0 105 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 OR5AR1Q8NGP9 310 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 WDR60Q8WVS4 1066 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 STMN2Q93045 179 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 MTFMTQ96DP5 389 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 SPDL1Q96EA4 605 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 CDRT15Q96T59 188 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ELF4Q99607 663 aaPredicted RBP14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 ACPTQ9BZG2 426 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 MRPL40Q9NQ50 206 aaKnown RBP14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 SPATA7Q9P0W8 599 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 CIDEBQ9UHD4 219 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 MOSPD1Q9UJG1 213 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 SUFUQ9UMX1 484 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 TMED5Q9Y3A6 229 aa14.09□□□□□ -0.15
POLR2J3-204ENST00000486319 CNOT1A5YKK6 2376 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 A0A1W2PP18 115 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 MED19A0JLT2 244 aaPredicted RBP14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 FAM234BA2RU67 622 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 TOR1BO14657 336 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 CFLARO15519 480 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 G6PDP11413 515 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 HSD3B1P14060 373 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 HSD3B2P26439 372 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 HTR1BP28222 390 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 MAPK1P28482 360 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 CCT8P50990 548 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 CLCNKAP51800 687 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 POLR2JP52435 117 aaKnown RBP14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 CLDN2P57739 230 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 ACTR3P61158 418 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 PSME3P61289 254 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 UFM1P61960 85 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 PRKG2Q13237 762 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 NFATC4Q14934 902 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 C10orf62Q5T681 223 aaPredicted RBP14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 RIPOR1Q6ZS17 1223 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 PHC3Q8NDX5 983 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 WDR20Q8TBZ3 569 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 PROKR1Q8TCW9 393 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 REPS1Q96D71 796 aa14.08□□□□□ -0.16
POLR2J3-204ENST00000486319 WDR34Q96EX3 536 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms