RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 ILKQ13418 452 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SQSTM1Q13501 440 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SPIDRQ14159 915 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SLBPQ14493 270 aaKnown RBP eCLIP13.35□□□□□ -0.27
NELFCD-209ENST00000486263 RBBP5Q15291 538 aaKnown RBP13.35□□□□□ -0.27
NELFCD-209ENST00000486263 TBCCQ15814 346 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SH2D4BQ5SQS7 431 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 CACHD1Q5VU97 1274 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 TMEM71Q6P5X7 295 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 FIGLAQ6QHK4 219 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SLCO4C1Q6ZQN7 724 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 RGS9BPQ6ZS82 235 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 FAM47EQ6ZV65 393 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 HOMEZQ8IX15 550 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 DCBLD1Q8N8Z6 715 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
NELFCD-209ENST00000486263 METTL6Q8TCB7 284 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 AGR3Q8TD06 166 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 AGAP11Q8TF27 550 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 CCT6BQ92526 530 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 UBE2E3Q969T4 207 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 ZUFSPQ96AP4 578 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 GRAMD1AQ96CP6 724 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 MAP3K3Q99759 626 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 NUDT22Q9BRQ3 303 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 KLHL25Q9H0H3 589 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 EHD1Q9H4M9 534 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 CCDC134Q9H6E4 229 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SLC6A20Q9NP91 592 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SOHLH2Q9NX45 425 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 ANKMY1Q9P2S6 941 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 TRPS1Q9UHF7 1281 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 SH2B3Q9UQQ2 575 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.35□□□□□ -0.27
NELFCD-209ENST00000486263 RNF11Q9Y3C5 154 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 FIS1Q9Y3D6 152 aa13.35□□□□□ -0.27
NELFCD-209ENST00000486263 COL5A1P20908 1838 aaPredicted RBP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 A8MU76 341 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 PPP6CO00743 305 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 UBFD1O14562 309 aaKnown RBP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 SNNO75324 88 aaPredicted RBP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 RFPL3O75679 317 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 ENO1P06733 434 aaKnown RBP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 UROSP10746 265 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 PVRP15151 417 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 EPORP19235 508 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 MAGP20916 626 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 MPSTP25325 297 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 GRIA3P42263 894 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 CASP2P42575 452 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 PPP1CAP62136 330 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 YBX1P67809 324 aaKnown RBP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 IFT88Q13099 833 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 TRAF3Q13114 568 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 CES4AQ5XG92 561 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 GRHL2Q6ISB3 625 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 MED27Q6P2C8 311 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 GLRX5Q86SX6 157 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 CLYBLQ8N0X4 340 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 LSMEM2Q8N112 164 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 CARFQ8N187 725 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 CDYL2Q8N8U2 506 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 L3MBTL4Q8NA19 623 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 ABHD11Q8NFV4 315 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 OR4D9Q8NGE8 314 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 FLVCR1-AS1Q8TAF5 88 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 REPS1Q96D71 796 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 PLCD4Q9BRC7 762 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 TWSG1Q9GZX9 223 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 ZNF395Q9H8N7 513 aaPredicted RBP13.34□□□□□ -0.27
NELFCD-209ENST00000486263 PFDN4Q9NQP4 134 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 SNX6Q9UNH7 406 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 KLHL20Q9Y2M5 609 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 TRAF6Q9Y4K3 522 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 PCDHGA11Q9Y5H2 935 aa13.34□□□□□ -0.27
NELFCD-209ENST00000486263 A0A1W2PQM1 296 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 ANKDD1BA6NHY2 528 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 SLC9B1P1A6NJY1 282 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 FFAR3O14843 346 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 AZIN1O14977 448 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 GPR42O15529 346 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 OR1F1O43749 312 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 ZBTB11O95625 1053 aaPredicted RBP13.33□□□□□ -0.28
NELFCD-209ENST00000486263 KRT6AP02538 564 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 C9P02748 559 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 KRT6BP04259 564 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 CAPN1P07384 714 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 KITP10721 976 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 CDK4P11802 303 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 PCNAP12004 261 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 JUPP14923 745 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 ST6GAL1P15907 406 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 CSF2RBP32927 897 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 MLLT3P42568 568 aaPredicted RBP13.33□□□□□ -0.28
NELFCD-209ENST00000486263 KRT6CP48668 564 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 SEPHS1P49903 392 aa13.33□□□□□ -0.28
NELFCD-209ENST00000486263 RPL14P50914 215 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms