RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TMEM79Q9BSE2 394 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 RTKNQ9BST9 563 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 RAB11FIP5Q9BXF6 653 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 MRPL18Q9H0U6 180 aaKnown RBP5.43□□□□□ -1.54
COPS3-208ENST00000486032 SEMA6CQ9H3T2 930 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 VIPAS39Q9H9C1 493 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 CCDC177Q9NQR7 707 aaPredicted RBP5.43□□□□□ -1.54
COPS3-208ENST00000486032 SOHLH2Q9NX45 425 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 OGFRQ9NZT2 677 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 SENP1Q9P0U3 644 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 TAC3Q9UHF0 121 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 EMCNQ9ULC0 261 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 APOBEC2Q9Y235 224 aaKnown RBP5.43□□□□□ -1.54
COPS3-208ENST00000486032 SLC22A14Q9Y267 594 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 RP1P56715 2156 aa5.43□□□□□ -1.54
COPS3-208ENST00000486032 ASXL3Q9C0F0 2248 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 TMEM120BA0PK00 339 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 FAM149AA5PLN7 773 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SLC9B1P1A6NJY1 282 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 A8MT66 165 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 E7ENX8 843 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 F8W735 103 aaPredicted RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 TAPBPO15533 448 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 DLX3O60479 287 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PLIN3O60664 434 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PRAMEF10O60809 474 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 KATNA1O75449 491 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 STK16O75716 305 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SUPT7LO94864 414 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CPNE6O95741 557 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MT-CO3P00414 261 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SBK3P0C264 359 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CDH1P12830 882 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CEACAM1P13688 526 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MTHFD2P13995 350 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 JUPP14923 745 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CPA3P15088 417 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PNLIPP16233 465 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CSRP1P21291 193 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 ATP5F1P24539 256 aaPredicted RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 EEF1DP29692 281 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 PRDX3P30048 256 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 CMPK1P30085 196 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PEBP1P30086 187 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 CRHR1P34998 444 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 HSD17B2P37059 387 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 GRIA3P42263 894 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 GPR3P46089 330 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CAPZBP47756 277 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 EPHA4P54764 986 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CDH13P55290 713 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 AP1S2P56377 157 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 GPLD1P80108 840 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CDKL1Q00532 357 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 E2F1Q01094 437 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MEF2AQ02078 507 aaPredicted RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 TAP2Q03519 686 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 GPS2Q13227 327 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 KIR2DS3Q14952 304 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SETDB1Q15047 1291 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 RBBP7Q16576 425 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CYP2A13Q16696 494 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CCDC153Q494R4 210 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CFAP157Q5JU67 520 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 HES3Q5TGS1 186 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 HHATQ5VTY9 493 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SULT1C3Q6IMI6 304 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 TMEM71Q6P5X7 295 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SPESP1Q6UW49 350 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 RBM44Q6ZP01 1051 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 SH2D5Q6ZV89 423 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 TMPRSS9Q7Z410 1059 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 B3GNT8Q7Z7M8 397 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 TMPRSS11BQ86T26 416 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 THOC6Q86W42 341 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 FAM129CQ86XR2 697 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MYLK4Q86YV6 388 aaPredicted RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 WFDC8Q8IUA0 241 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PLXDC1Q8IUK5 500 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 TCAIMQ8N3R3 496 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 DCBLD1Q8N8Z6 715 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 PDPRQ8NCN5 879 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 FBXO15Q8NCQ5 510 aaPredicted RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 RHEBL1Q8TAI7 183 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 N4BP2L2Q92802 583 aaPredicted RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 ATP6V1E2Q96A05 226 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SLC22A18Q96BI1 424 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 RHBDF1Q96CC6 855 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 TLCD1Q96CP7 247 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 ZDHHC12Q96GR4 267 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 CCDC74BQ96LY2 380 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 OR2A14Q96R47 310 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MENTQ9BUN1 341 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MECRQ9BV79 373 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 SHCBP1LQ9BZQ2 653 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 UCK1Q9HA47 277 aa5.42□□□□□ -1.54
COPS3-208ENST00000486032 MRPS30Q9NP92 439 aaKnown RBP5.42□□□□□ -1.54
COPS3-208ENST00000486032 SEMA4BQ9NPR2 832 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms