RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	MAB21L3	Q8N8X9	362 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	DMBX1	Q8NFW5	382 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	OR10Q1	Q8NGQ4	319 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	OR13A1	Q8NGR1	328 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	PSMA8	Q8TAA3	256 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	ZNF583	Q96ND8	569 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	ATP6V0B	Q99437	205 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	ATG101	Q9BSB4	218 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	URM1	Q9BTM9	101 aa	Known RBP	3.74	□□□□□ -1.81
FN1-222	ENST00000485567	CDK19	Q9BWU1	502 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	KRTAP4-11	Q9BYQ6	195 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	TRIM6	Q9C030	488 aa	Predicted RBP	3.74	□□□□□ -1.81
FN1-222	ENST00000485567	SLC5A7	Q9GZV3	580 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	SDCBP2	Q9H190	292 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	CPVL	Q9H3G5	476 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	TFB2M	Q9H5Q4	396 aa	Known RBP	3.74	□□□□□ -1.81
FN1-222	ENST00000485567	ECHDC1	Q9NTX5	307 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	STUB1	Q9UNE7	303 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	GPR132	Q9UNW8	380 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	AGTPBP1	Q9UPW5	1226 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	PCDHGA1	Q9Y5H4	931 aa		3.74	□□□□□ -1.81
FN1-222	ENST00000485567	ACE	P12821	1306 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567		A0A1B0GUV1	79 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	C13orf42	A0A1B0GVH6	325 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	TMEM110-MUSTN1	A8MSY1	372 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	C2CD4D	B7Z1M9	353 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567		F8VVB4	439 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567		F8VWA3	439 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	NPIPA3	F8WFD2	350 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	BOLA2-SMG1P6	H3BVE0	249 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	ATP6V0E1	O15342	81 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	KERA	O60938	352 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	NR3C1	P04150	777 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	IGHV4-31	P0DP07	118 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	CDH3	P22223	829 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	EVC	P57679	992 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	ARF5	P84085	180 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	FOLH1	Q04609	750 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	ARHGAP1	Q07960	439 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	IL10RB	Q08334	325 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	RPA4	Q13156	261 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	RPS6KA1	Q15418	735 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	IZUMO4	Q1ZYL8	232 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	IQCC	Q4KMZ1	466 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	TECRL	Q5HYJ1	363 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	C20orf194	Q5TEA3	1177 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	WBP2NL	Q6ICG8	309 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	PODNL1	Q6PEZ8	512 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	PIGW	Q7Z7B1	504 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	RTN4RL2	Q86UN3	420 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	CDK20	Q8IZL9	346 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	EID3	Q8N140	333 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	DNAJC22	Q8N4W6	341 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	RFLNB	Q8N5W9	214 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	SPATA20	Q8TB22	786 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	ATP6V0A1	Q93050	837 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	PYCR2	Q96C36	320 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	TRIM44	Q96DX7	344 aa	Predicted RBP	3.73	□□□□□ -1.81
FN1-222	ENST00000485567	NSL1	Q96IY1	281 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	PKP4	Q99569	1192 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	CACNG6	Q9BXT2	260 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	UBQLN3	Q9H347	655 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	UPF2	Q9HAU5	1272 aa	Known RBP	3.73	□□□□□ -1.81
FN1-222	ENST00000485567	CHST11	Q9NPF2	352 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	SPG21	Q9NZD8	308 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	FLRT3	Q9NZU0	649 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	TRPC4	Q9UBN4	977 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	STX8	Q9UNK0	236 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	CHKB	Q9Y259	395 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	KLK4	Q9Y5K2	254 aa		3.73	□□□□□ -1.81
FN1-222	ENST00000485567	IGLV9-49	A0A0B4J1Y8	123 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	CTDSPL	O15194	276 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	CRCP	O75575	148 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	OLFM2	O95897	454 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	SERPING1	P05155	500 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	STAG3L1	P0CL83	205 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	KRT3	P12035	628 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	IL4R	P24394	825 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	NKX2-1	P43699	371 aa	Predicted RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	HMGN5	P82970	282 aa	Known RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	UGP2	Q16851	508 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	SHROOM1	Q2M3G4	852 aa	Predicted RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	WSCD2	Q2TBF2	565 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	AARD	Q4LEZ3	155 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	RAB12	Q6IQ22	244 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	IRGC	Q6NXR0	463 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	C16orf87	Q6PH81	154 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	PRSS55	Q6UWB4	352 aa	Predicted RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	CCBE1	Q6UXH8	406 aa	Predicted RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	C9orf139	Q6ZV77	190 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	ZNF540	Q8NDQ6	660 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	SLC24A4	Q8NFF2	622 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	IPMK	Q8NFU5	416 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	TAF4B	Q92750	862 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	BCL2L2	Q92843	193 aa	Predicted RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	NDN	Q99608	321 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	C17orf62	Q9BQA9	187 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	WAC	Q9BTA9	647 aa		3.72	□□□□□ -1.81
FN1-222	ENST00000485567	TRMT61B	Q9BVS5	477 aa	Known RBP	3.72	□□□□□ -1.81
FN1-222	ENST00000485567	ACAT2	Q9BWD1	397 aa		3.72	□□□□□ -1.81

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